Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 Y_RNA.242-201ENST00000364473 110 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 MIR938-201ENST00000401216 83 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 SNORA36B-201ENST00000410438 131 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.12□□□□□ -2.39
SLC1A1P43005 SNORD11-201ENST00000459124 84 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 snoU13.16-201ENST00000459350 104 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 AC091959.1-201ENST00000495857 238 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 SNORA62.5-201ENST00000516634 120 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 AC022306.2-201ENST00000617563 647 ntBASIC0.12□□□□□ -2.39
SLC1A1P43005 RNU6-674P-201ENST00000363831 107 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 PDCL2P1-201ENST00000419302 352 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 AC099799.1-201ENST00000439809 192 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 Y_RNA.653-201ENST00000459091 95 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 RNU7-110P-201ENST00000516891 62 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 RNA5SP94-201ENST00000516917 108 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 AC006600.1-201ENST00000572529 153 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.11□□□□□ -2.39
SLC1A1P43005 VN1R91P-201ENST00000594377 169 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 SNORA25.18-201ENST00000607153 114 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 AC134878.1-201ENST00000619901 243 ntBASIC0.11□□□□□ -2.39
SLC1A1P43005 RNU6-1048P-201ENST00000364054 107 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 Y_RNA.279-201ENST00000364763 95 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 Y_RNA.462-201ENST00000384268 102 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 MIR559-201ENST00000385188 96 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 SNORD100-201ENST00000408573 76 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 AC236972.2-201ENST00000434979 310 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 RNU7-141P-201ENST00000459304 62 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 AC107297.1-201ENST00000459991 176 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 RNU7-25P-201ENST00000516544 62 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 RNA5SP480-201ENST00000516840 109 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 AC090897.1-201ENST00000580909 226 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 AC008608.1-201ENST00000603910 127 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 AL355297.3-201ENST00000604082 446 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
SLC1A1P43005 AC010332.2-201ENST00000613083 1904 ntBASIC0.1□□□□□ -2.39
SLC1A1P43005 RNU6-490P-201ENST00000362985 107 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 Y_RNA.160-201ENST00000363677 92 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 RNU4-50P-201ENST00000364361 141 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 SNORA63C-201ENST00000364578 129 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 SNORA24-201ENST00000384096 131 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 Y_RNA.547-201ENST00000384654 119 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 RNU7-67P-201ENST00000459003 62 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 AC005357.1-201ENST00000588399 301 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 AC011373.1-201ENST00000607270 237 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 AC010205.1-201ENST00000616668 449 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 MIR6740-201ENST00000618268 113 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 uc_338.16-201ENST00000621804 95 ntBASIC0.09□□□□□ -2.4
SLC1A1P43005 SNORD114-26-201ENST00000363543 72 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
SLC1A1P43005 RNU6-364P-201ENST00000384387 107 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 Y_RNA.494-201ENST00000384432 111 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 RNU2-14P-201ENST00000411053 191 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 MTND1P34-201ENST00000438556 671 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 RNU7-102P-201ENST00000458948 62 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 RNU6-699P-201ENST00000517081 110 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 Y_RNA.772-201ENST00000606692 102 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 AC133104.2-201ENST00000615272 193 ntBASIC0.08□□□□□ -2.4
SLC1A1P43005 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 Y_RNA.241-201ENST00000364470 117 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 SNORD81.2-201ENST00000365153 76 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 SNORA72.4-201ENST00000384174 132 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-1319P-201ENST00000390855 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-747P-201ENST00000390928 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-241P-201ENST00000391148 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 MIR548O-201ENST00000408583 114 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU4-30P-201ENST00000410245 143 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-447P-201ENST00000410293 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-1118P-201ENST00000410382 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-1076P-201ENST00000410397 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-355P-201ENST00000410427 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-791P-201ENST00000410467 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-705P-201ENST00000410601 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-1100P-201ENST00000410691 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-860P-201ENST00000410860 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-1217P-201ENST00000411276 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-785P-201ENST00000411324 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 MIR18B-201ENST00000454574 71 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 RNU6-559P-201ENST00000516151 98 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 U6.90-201ENST00000614007 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 U6.70-201ENST00000620287 104 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 AC078938.1-201ENST00000620993 318 ntBASIC0.07□□□□□ -2.4
SLC1A1P43005 SNORA8.2-201ENST00000384372 139 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 SNORD38B-201ENST00000384690 67 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 MIR518F-201ENST00000384973 87 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 MIR125B2-201ENST00000385128 89 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 AL358176.2-201ENST00000425769 204 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 RNU6-958P-201ENST00000516995 106 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.06□□□□□ -2.4
SLC1A1P43005 SNORD38B-202ENST00000625943 69 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 MIR4272-201ENST00000635924 64 ntBASIC0.06□□□□□ -2.4
SLC1A1P43005 SNORD115-34-201ENST00000362441 82 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms