Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MIR1255B1-201ENST00000636325 63 ntBASIC3.47□□□□□ -1.85
CLCN1P35523 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCN1P35523 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLCN1P35523 AL442644.1-201ENST00000454390 3105 ntBASIC3.46□□□□□ -1.85
CLCN1P35523 Y_RNA.299-201ENST00000364973 94 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 Y_RNA.342-201ENST00000365352 113 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 SNORA70.7-201ENST00000384159 133 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 MIR452-201ENST00000385020 85 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 HMGN2P35-201ENST00000412164 270 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 RNU7-113P-201ENST00000459273 62 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 MIR7975-201ENST00000619350 68 ntBASIC3.46□□□□□ -1.86
CLCN1P35523 Y_RNA.10-201ENST00000362371 110 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 SNORD115-19-201ENST00000363098 82 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 SNORD115-18-201ENST00000363293 82 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 RNU6-1099P-201ENST00000363533 107 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 SNORA38-201ENST00000363946 132 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 SNORD115-17-201ENST00000364612 82 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 Y_RNA.370-201ENST00000365589 108 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 RNU6-1031P-201ENST00000384773 107 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 RN7SKP192-201ENST00000411291 327 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 UBBP3-201ENST00000445497 241 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 RNU6-893P-201ENST00000458841 100 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 Y_RNA.773-201ENST00000607168 90 ntBASIC3.45□□□□□ -1.86
CLCN1P35523 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLCN1P35523 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CLCN1P35523 Y_RNA.171-201ENST00000363760 102 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 RNU6-409P-201ENST00000384114 104 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 Y_RNA.601-201ENST00000410500 113 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 RNU2-7P-201ENST00000410794 178 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 RNU7-67P-201ENST00000459003 62 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 RNA5SP137-201ENST00000516833 135 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 AC107016.2-201ENST00000547968 190 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 MIR3152-201ENST00000579801 74 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 AC064859.1-201ENST00000624741 174 ntBASIC3.44□□□□□ -1.86
CLCN1P35523 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLCN1P35523 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLCN1P35523 RNU6-363P-201ENST00000362895 105 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 VTRNA1-1-201ENST00000363120 99 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNU4-67P-201ENST00000364569 141 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNU6-1134P-201ENST00000365156 101 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 MIR136-201ENST00000385207 82 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNA5SP274-201ENST00000410484 108 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNU4-69P-201ENST00000410677 143 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNU6-733P-201ENST00000410759 104 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 PGBD4P5-201ENST00000445958 426 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 RNU7-34P-201ENST00000459394 64 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCN1P35523 RNU6-958P-201ENST00000516995 106 ntBASIC3.43□□□□□ -1.86
CLCN1P35523 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.43□□□□□ -1.86
CLCN1P35523 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCN1P35523 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCN1P35523 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLCN1P35523 AL365361.1-201ENST00000566942 3481 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCN1P35523 RNU6-1319P-201ENST00000390855 104 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RNU6-747P-201ENST00000390928 104 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RNU6-241P-201ENST00000391148 104 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RNU6-177P-201ENST00000411257 104 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 HMGN2P3-201ENST00000433603 273 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 HMGN2P5-201ENST00000436882 273 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 AC093850.1-201ENST00000454121 251 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 BX510359.1-201ENST00000456973 237 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RPPH1-2P-201ENST00000516688 293 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 RNU7-53P-201ENST00000516705 60 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCN1P35523 MIR4694-201ENST00000578534 80 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 AC010297.1-201ENST00000623948 149 ntBASIC3.42□□□□□ -1.86
CLCN1P35523 AP000648.3-201ENST00000623539 4507 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCN1P35523 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCN1P35523 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCN1P35523 RNU1-109P-201ENST00000383960 147 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 Y_RNA.466-201ENST00000384294 113 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 MIR520A-201ENST00000384862 85 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 RNVU1-2-201ENST00000516326 135 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 RNU6-56P-201ENST00000516986 93 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 MIR4513-201ENST00000581077 86 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 MIR3651-201ENST00000630427 90 ntBASIC3.41□□□□□ -1.86
CLCN1P35523 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLCN1P35523 RNA5SP173-201ENST00000364857 136 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 Y_RNA.360-201ENST00000365512 102 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 MIR450A2-201ENST00000385022 100 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 SNORD77B-201ENST00000391112 67 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 MIR1283-2-201ENST00000408621 87 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN1P35523 RNA5SP57-201ENST00000459463 123 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 RN7SKP12-201ENST00000516275 143 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 RN7SKP57-201ENST00000517248 293 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 AC026421.1-201ENST00000519101 163 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 AC103810.6-201ENST00000606708 136 ntBASIC3.4□□□□□ -1.87
CLCN1P35523 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLCN1P35523 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCN1P35523 SNORA22.1-201ENST00000362701 134 ntBASIC3.39□□□□□ -1.87
CLCN1P35523 RNU6-832P-201ENST00000363319 107 ntBASIC3.39□□□□□ -1.87
CLCN1P35523 RNA5SP465-201ENST00000391195 109 ntBASIC3.39□□□□□ -1.87
CLCN1P35523 RPS29P29-201ENST00000456396 171 ntBASIC3.39□□□□□ -1.87
CLCN1P35523 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms