Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU6-1286P-201ENST00000383871 107 ntBASIC-3.03□□□□□ -2.9
CPS1P31327 Y_RNA.407-201ENST00000383986 113 ntBASIC-3.03□□□□□ -2.9
CPS1P31327 MTND2P32-201ENST00000521584 1038 ntBASIC-3.03□□□□□ -2.9
CPS1P31327 AC008507.2-201ENST00000588402 1176 ntBASIC-3.03□□□□□ -2.9
CPS1P31327 Y_RNA.110-201ENST00000363220 99 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 RNU6-673P-201ENST00000365084 104 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 RNU4-55P-201ENST00000410731 137 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 U8.19-201ENST00000459095 133 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-3.04□□□□□ -2.9
CPS1P31327 SNORA25.10-201ENST00000515926 124 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 AC104072.1-201ENST00000568817 668 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 AC107905.1-201ENST00000616204 426 ntBASIC-3.04□□□□□ -2.9
CPS1P31327 RNA5SP237-201ENST00000410414 113 ntBASIC-3.05□□□□□ -2.9
CPS1P31327 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-3.05□□□□□ -2.9
CPS1P31327 AC093783.1-201ENST00000612976 329 ntBASIC-3.05□□□□□ -2.9
CPS1P31327 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
CPS1P31327 Y_RNA.221-201ENST00000364248 96 ntBASIC-3.06□□□□□ -2.9
CPS1P31327 Y_RNA.244-201ENST00000364484 109 ntBASIC-3.06□□□□□ -2.9
CPS1P31327 RNU6-412P-201ENST00000516434 106 ntBASIC-3.06□□□□□ -2.9
CPS1P31327 TUSC7.1-201ENST00000610969 165 ntBASIC-3.06□□□□□ -2.9
CPS1P31327 RNU6-553P-201ENST00000364047 96 ntBASIC-3.07□□□□□ -2.9
CPS1P31327 AC093423.1-201ENST00000440817 142 ntBASIC-3.07□□□□□ -2.9
CPS1P31327 RNU7-51P-201ENST00000516560 62 ntBASIC-3.07□□□□□ -2.9
CPS1P31327 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-3.07□□□□□ -2.9
CPS1P31327 RNU6-484P-201ENST00000384016 107 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-3.08□□□□□ -2.9
CPS1P31327 RNU6-966P-201ENST00000516479 104 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 SNORA25.14-201ENST00000516481 132 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 AC091144.1-201ENST00000519573 138 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 AC109347.2-201ENST00000610220 349 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 AC009159.2-201ENST00000617603 606 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 AC022418.1-201ENST00000624118 445 ntBASIC-3.08□□□□□ -2.9
CPS1P31327 Y_RNA.323-201ENST00000365157 109 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU6-1130P-201ENST00000365434 107 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 U8.22-201ENST00000459141 133 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 SNORA2.1-201ENST00000363089 137 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU4-58P-201ENST00000363192 141 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU6-727P-201ENST00000363592 107 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU4-75P-201ENST00000364621 146 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU6-466P-201ENST00000391224 103 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 RNU6-531P-201ENST00000516694 104 ntBASIC-3.09□□□□□ -2.9
CPS1P31327 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-3.09□□□□□ -2.9
CPS1P31327 AC022616.4-201ENST00000522985 181 ntBASIC-3.1□□□□□ -2.91
CPS1P31327 AL137161.1-201ENST00000532231 390 ntBASIC-3.1□□□□□ -2.91
CPS1P31327 RNU6-1127P-201ENST00000384580 107 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 MIR507-201ENST00000385234 94 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 RNU6-325P-201ENST00000411132 105 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 AC084290.1-201ENST00000434995 374 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 SNORD2-201ENST00000459163 69 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 RPL30P10-201ENST00000488148 337 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 RNU5B-6P-201ENST00000516765 68 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 MIR3139-201ENST00000579145 76 ntBASIC-3.11□□□□□ -2.91
CPS1P31327 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-3.11□□□□□ -2.91
CPS1P31327 RNU6-704P-201ENST00000364162 103 ntBASIC-3.12□□□□□ -2.91
CPS1P31327 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.12□□□□□ -2.91
CPS1P31327 MIR626-201ENST00000385032 94 ntBASIC-3.12□□□□□ -2.91
CPS1P31327 MIR4789-201ENST00000577469 82 ntBASIC-3.12□□□□□ -2.91
CPS1P31327 U6.112-201ENST00000384129 70 ntBASIC-3.13□□□□□ -2.91
CPS1P31327 RMST_3.1-201ENST00000611651 109 ntBASIC-3.13□□□□□ -2.91
CPS1P31327 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 SNORD115-8-201ENST00000363856 82 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 Y_RNA.229-201ENST00000364347 113 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 SNORD115-38-201ENST00000365037 82 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 RNU6-949P-201ENST00000384040 107 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 Y_RNA.408-201ENST00000383987 102 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-3.14□□□□□ -2.91
CPS1P31327 RNU7-53P-201ENST00000516705 60 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 AC141846.1-201ENST00000568348 142 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 AC022441.3-201ENST00000605737 136 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 AC027449.1-201ENST00000608890 407 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 AC087683.2-201ENST00000611384 326 ntBASIC-3.14□□□□□ -2.91
CPS1P31327 SNORD115-34-201ENST00000362441 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-12-201ENST00000362583 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-29-201ENST00000362834 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 RNU6-227P-201ENST00000362865 103 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-9-201ENST00000362912 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-21-201ENST00000362963 81 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-14-201ENST00000363090 81 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-13-201ENST00000363358 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-11-201ENST00000363616 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-5-201ENST00000363633 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-39-201ENST00000363694 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-4-201ENST00000363810 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-16-201ENST00000363887 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-6-201ENST00000363942 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-15-201ENST00000364809 81 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-1-201ENST00000364961 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-26-201ENST00000365067 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-10-201ENST00000365073 81 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-43-201ENST00000365503 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-36-201ENST00000365629 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 Y_RNA.785-201ENST00000384290 109 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 SNORD115-40-201ENST00000606510 82 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 Y_RNA.802-201ENST00000614892 130 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 AC097460.3-201ENST00000623099 442 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 AC091931.1-201ENST00000623488 728 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 snoR1.1-201ENST00000628177 80 ntBASIC-3.15□□□□□ -2.91
CPS1P31327 RNU6-481P-201ENST00000384194 107 ntBASIC-3.16□□□□□ -2.92
CPS1P31327 RNU6-107P-201ENST00000516643 102 ntBASIC-3.16□□□□□ -2.92
CPS1P31327 RNU6-685P-201ENST00000517088 95 ntBASIC-3.16□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms