Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 RNU4-73P-201ENST00000363164 141 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 Y_RNA.813-201ENST00000364639 102 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 SNORA51.10-201ENST00000384418 136 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MIR1302-11-201ENST00000408051 138 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MIR1302-9-201ENST00000408365 138 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MIR1302-10-201ENST00000408734 138 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.64□□□□□ -2.31
PTPN6P29350 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MIR2115-201ENST00000516657 100 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 AC005357.1-201ENST00000588399 301 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 MIR1302-2-201ENST00000607096 138 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 Y_RNA.804-201ENST00000615262 101 ntBASIC0.64□□□□□ -2.31
PTPN6P29350 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.63□□□□□ -2.31
PTPN6P29350 RNU6-801P-201ENST00000364087 105 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 SNORA1.2-201ENST00000365189 134 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RNU6-396P-201ENST00000365369 105 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 Y_RNA.393-201ENST00000383936 102 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 MT-TD-201ENST00000387419 68 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 SNORD72-201ENST00000390994 80 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RNU6-130P-201ENST00000411112 103 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RNU6-1170P-201ENST00000515974 106 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RNU7-181P-201ENST00000517234 74 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PTPN6P29350 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.63□□□□□ -2.31
PTPN6P29350 MIR4300-201ENST00000581016 96 ntBASIC0.63□□□□□ -2.31
PTPN6P29350 SNORD113-8-201ENST00000363497 74 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 Y_RNA.537-201ENST00000384626 109 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 SNORA26.5-201ENST00000391215 123 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 RNA5SP95-201ENST00000410319 137 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 RNU6-613P-201ENST00000410412 108 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 AC023449.1-201ENST00000454464 154 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 SNORD11-201ENST00000459124 84 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 SCARNA8-201ENST00000515924 131 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 RNU6-1046P-201ENST00000516538 107 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.62□□□□□ -2.31
PTPN6P29350 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.62□□□□□ -2.31
PTPN6P29350 AC006441.5-201ENST00000612680 209 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 MIR376A1-201ENST00000616574 68 ntBASIC0.62□□□□□ -2.31
PTPN6P29350 RNU6-899P-201ENST00000363947 107 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 AL603910.2-201ENST00000407268 136 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPN6P29350 RNU6-191P-201ENST00000516295 94 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 RN7SL793P-201ENST00000583259 296 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 AL133255.1-201ENST00000606374 441 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 MIR4791-201ENST00000607666 84 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 MIR6779-201ENST00000617283 64 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
PTPN6P29350 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 Y_RNA.222-201ENST00000364264 102 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 SNORA63.7-201ENST00000365579 123 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 Y_RNA.602-201ENST00000410535 92 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 RNU6-397P-201ENST00000516226 104 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 AC124312.5-201ENST00000604451 268 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 uc_338.22-201ENST00000622722 187 ntBASIC0.6□□□□□ -2.31
PTPN6P29350 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
PTPN6P29350 RNU6-1205P-201ENST00000363625 106 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 RNU6-144P-201ENST00000383951 107 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 Y_RNA.418-201ENST00000384029 102 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 RNY3P14-201ENST00000384309 102 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 RNU6-847P-201ENST00000411115 108 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 MTND4P19-201ENST00000446659 478 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 MIR548AO-201ENST00000579992 96 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 AC090574.1-201ENST00000623186 233 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 MTND1P7-201ENST00000632801 297 ntBASIC0.59□□□□□ -2.31
PTPN6P29350 MIR369-201ENST00000362155 70 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 Y_RNA.168-201ENST00000363740 102 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PTPN6P29350 Y_RNA.445-201ENST00000384168 102 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 Y_RNA.569-201ENST00000384749 103 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 RNU6-308P-201ENST00000390957 107 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 RNU6-764P-201ENST00000516396 105 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 AC090971.5-201ENST00000621102 293 ntBASIC0.58□□□□□ -2.32
PTPN6P29350 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
PTPN6P29350 RNU4-90P-201ENST00000362773 141 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 Y_RNA.183-201ENST00000363882 113 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 Y_RNA.395-201ENST00000383945 109 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 Y_RNA.431-201ENST00000384086 102 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 SNORD105-201ENST00000386910 85 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
PTPN6P29350 RNU6-763P-201ENST00000390865 106 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 AC022028.1-201ENST00000412054 408 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 AC107297.1-201ENST00000459991 176 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 RNU4-57P-201ENST00000515980 135 ntBASIC0.57□□□□□ -2.32
PTPN6P29350 AC018659.1-201ENST00000551083 169 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms