Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU6-574P-201ENST00000384265 107 ntBASIC0.96□□□□□ -2.26
RPA1P27694 RNU6-1105P-201ENST00000384774 107 ntBASIC0.96□□□□□ -2.26
RPA1P27694 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.96□□□□□ -2.26
RPA1P27694 AC002429.1-201ENST00000437672 148 ntBASIC0.96□□□□□ -2.26
RPA1P27694 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
RPA1P27694 RNU6-437P-201ENST00000459408 95 ntBASIC0.96□□□□□ -2.26
RPA1P27694 RPS26P48-201ENST00000491713 339 ntBASIC0.96□□□□□ -2.26
RPA1P27694 CYCTP-201ENST00000504253 315 ntBASIC0.96□□□□□ -2.26
RPA1P27694 SERF1AP1-201ENST00000514575 187 ntBASIC0.96□□□□□ -2.26
RPA1P27694 RNU6-947P-201ENST00000516264 106 ntBASIC0.96□□□□□ -2.26
RPA1P27694 AL117187.1-201ENST00000555482 181 ntBASIC0.96□□□□□ -2.26
RPA1P27694 AC013791.1-201ENST00000616619 62 ntBASIC0.96□□□□□ -2.26
RPA1P27694 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPA1P27694 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RPA1P27694 RNU6-1309P-201ENST00000363305 108 ntBASIC0.95□□□□□ -2.26
RPA1P27694 Y_RNA.133-201ENST00000363428 110 ntBASIC0.95□□□□□ -2.26
RPA1P27694 RNU6-1011P-201ENST00000384668 107 ntBASIC0.95□□□□□ -2.26
RPA1P27694 SNORD28B-201ENST00000390993 75 ntBASIC0.95□□□□□ -2.26
RPA1P27694 MIR891A-201ENST00000401237 79 ntBASIC0.95□□□□□ -2.26
RPA1P27694 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
RPA1P27694 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.95□□□□□ -2.26
RPA1P27694 RNU7-41P-201ENST00000515917 61 ntBASIC0.95□□□□□ -2.26
RPA1P27694 Y_RNA.680-201ENST00000516441 93 ntBASIC0.95□□□□□ -2.26
RPA1P27694 SNORA27.4-201ENST00000516650 95 ntBASIC0.95□□□□□ -2.26
RPA1P27694 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
RPA1P27694 MIR8062-201ENST00000621515 85 ntBASIC0.95□□□□□ -2.26
RPA1P27694 AC027279.3-201ENST00000625055 122 ntBASIC0.95□□□□□ -2.26
RPA1P27694 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RPA1P27694 Y_RNA.47-201ENST00000362697 108 ntBASIC0.94□□□□□ -2.26
RPA1P27694 Y_RNA.336-201ENST00000365307 109 ntBASIC0.94□□□□□ -2.26
RPA1P27694 RNU6-326P-201ENST00000365480 107 ntBASIC0.94□□□□□ -2.26
RPA1P27694 RNU6-1289P-201ENST00000384431 106 ntBASIC0.94□□□□□ -2.26
RPA1P27694 Y_RNA.574-201ENST00000384766 95 ntBASIC0.94□□□□□ -2.26
RPA1P27694 MIR570-201ENST00000384917 97 ntBASIC0.94□□□□□ -2.26
RPA1P27694 RNU2-38P-201ENST00000410856 79 ntBASIC0.94□□□□□ -2.26
RPA1P27694 TRBVB-201ENST00000477100 408 ntBASIC0.94□□□□□ -2.26
RPA1P27694 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
RPA1P27694 MIR5692C2-201ENST00000577959 77 ntBASIC0.94□□□□□ -2.26
RPA1P27694 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.94□□□□□ -2.26
RPA1P27694 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
RPA1P27694 AL353621.2-201ENST00000605340 133 ntBASIC0.94□□□□□ -2.26
RPA1P27694 AL021707.8-201ENST00000609428 183 ntBASIC0.94□□□□□ -2.26
RPA1P27694 UBE2WP1-201ENST00000362030 340 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-1084P-201ENST00000362498 107 ntBASIC0.93□□□□□ -2.26
RPA1P27694 Y_RNA.76-201ENST00000362931 109 ntBASIC0.93□□□□□ -2.26
RPA1P27694 SNORA25.3-201ENST00000363205 127 ntBASIC0.93□□□□□ -2.26
RPA1P27694 SNORA63-201ENST00000363450 132 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-674P-201ENST00000363831 107 ntBASIC0.93□□□□□ -2.26
RPA1P27694 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-211P-201ENST00000384047 107 ntBASIC0.93□□□□□ -2.26
RPA1P27694 Y_RNA.459-201ENST00000384251 102 ntBASIC0.93□□□□□ -2.26
RPA1P27694 Y_RNA.461-201ENST00000384263 103 ntBASIC0.93□□□□□ -2.26
RPA1P27694 Y_RNA.494-201ENST00000384432 111 ntBASIC0.93□□□□□ -2.26
RPA1P27694 MT-TT-201ENST00000387460 66 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-131P-201ENST00000391144 107 ntBASIC0.93□□□□□ -2.26
RPA1P27694 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.93□□□□□ -2.26
RPA1P27694 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.93□□□□□ -2.26
RPA1P27694 SCARNA8-201ENST00000515924 131 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU6-327P-201ENST00000516270 127 ntBASIC0.93□□□□□ -2.26
RPA1P27694 SNORA18.7-201ENST00000516910 131 ntBASIC0.93□□□□□ -2.26
RPA1P27694 RNU7-116P-201ENST00000516940 62 ntBASIC0.93□□□□□ -2.26
RPA1P27694 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.93□□□□□ -2.26
RPA1P27694 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.93□□□□□ -2.26
RPA1P27694 AC006504.6-201ENST00000590142 199 ntBASIC0.93□□□□□ -2.26
RPA1P27694 AL049861.1-201ENST00000603130 150 ntBASIC0.93□□□□□ -2.26
RPA1P27694 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.93□□□□□ -2.26
RPA1P27694 SNORA25.1-201ENST00000362326 128 ntBASIC0.92□□□□□ -2.26
RPA1P27694 Y_RNA.145-201ENST00000363527 102 ntBASIC0.92□□□□□ -2.26
RPA1P27694 RNU6-268P-201ENST00000364174 107 ntBASIC0.92□□□□□ -2.26
RPA1P27694 snoU2_19.4-201ENST00000364329 80 ntBASIC0.92□□□□□ -2.26
RPA1P27694 Y_RNA.275-201ENST00000364726 110 ntBASIC0.92□□□□□ -2.26
RPA1P27694 RNU6-453P-201ENST00000516819 85 ntBASIC0.92□□□□□ -2.26
RPA1P27694 MIR548AR-201ENST00000582191 57 ntBASIC0.92□□□□□ -2.26
RPA1P27694 AC008507.4-201ENST00000585464 127 ntBASIC0.92□□□□□ -2.26
RPA1P27694 AL512605.2-201ENST00000592972 256 ntBASIC0.92□□□□□ -2.26
RPA1P27694 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
RPA1P27694 AC011921.3-201ENST00000605540 361 ntBASIC0.92□□□□□ -2.26
RPA1P27694 Y_RNA.24-201ENST00000362508 103 ntBASIC0.91□□□□□ -2.26
RPA1P27694 RNU6-899P-201ENST00000363947 107 ntBASIC0.91□□□□□ -2.26
RPA1P27694 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
RPA1P27694 SNORA25.9-201ENST00000365087 128 ntBASIC0.91□□□□□ -2.26
RPA1P27694 AL078595.1-201ENST00000404458 226 ntBASIC0.91□□□□□ -2.26
RPA1P27694 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.91□□□□□ -2.26
RPA1P27694 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
RPA1P27694 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
RPA1P27694 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
RPA1P27694 RNY3P16-201ENST00000516338 101 ntBASIC0.91□□□□□ -2.26
RPA1P27694 AC007751.1-201ENST00000529260 376 ntBASIC0.91□□□□□ -2.26
RPA1P27694 AL442663.2-201ENST00000554385 511 ntBASIC0.91□□□□□ -2.26
RPA1P27694 PRELID3BP2-201ENST00000605362 201 ntBASIC0.91□□□□□ -2.26
RPA1P27694 Y_RNA.152-201ENST00000363578 100 ntBASIC0.9□□□□□ -2.27
RPA1P27694 RNU6-1205P-201ENST00000363625 106 ntBASIC0.9□□□□□ -2.27
RPA1P27694 Y_RNA.277-201ENST00000364754 102 ntBASIC0.9□□□□□ -2.27
RPA1P27694 Y_RNA.293-201ENST00000364908 93 ntBASIC0.9□□□□□ -2.27
RPA1P27694 MIR1302-7-201ENST00000408841 72 ntBASIC0.9□□□□□ -2.27
RPA1P27694 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
RPA1P27694 AC024067.1-201ENST00000426199 223 ntBASIC0.9□□□□□ -2.27
RPA1P27694 SNORD123-201ENST00000459473 70 ntBASIC0.9□□□□□ -2.27
RPA1P27694 RNU6-561P-201ENST00000516222 102 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms