Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MIR559-201ENST00000385188 96 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 RNU6-559P-201ENST00000516151 98 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 AC008608.1-201ENST00000603910 127 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 SNORD115-40-201ENST00000606510 82 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 uc_338.6-201ENST00000613544 171 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 MIR6740-201ENST00000618268 113 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 SNORD38B-202ENST00000625943 69 ntBASIC0.06□□□□□ -2.4
RAB4AP20338 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.06□□□□□ -2.4
RAB4AP20338 SNORD118-201ENST00000363593 134 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 RNU6-1048P-201ENST00000364054 107 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 SNORD114-22-201ENST00000365423 72 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 SNORA72.4-201ENST00000384174 132 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 SNORA8.2-201ENST00000384372 139 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 RNU6-21P-201ENST00000384710 107 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR518F-201ENST00000384973 87 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR125B2-201ENST00000385128 89 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 AC023449.1-201ENST00000454464 154 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 RNU6-863P-201ENST00000515989 104 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR5000-201ENST00000577717 103 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR6513-201ENST00000621188 64 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
RAB4AP20338 MIR548J-201ENST00000408833 112 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 RNU6-1165P-201ENST00000410119 107 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 RNU2-14P-201ENST00000411053 191 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 RNU7-185P-201ENST00000459215 60 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 RNU6-958P-201ENST00000516995 106 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 RNU6-699P-201ENST00000517081 110 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 MIR4711-201ENST00000578274 70 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 AC113139.1-201ENST00000605049 239 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 AC025253.1-201ENST00000613623 543 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 AC078938.1-201ENST00000620993 318 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 MIR4272-201ENST00000635924 64 ntBASIC0.04□□□□□ -2.4
RAB4AP20338 SNORD81.2-201ENST00000365153 76 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 Y_RNA.551-201ENST00000384661 102 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 MIR588-201ENST00000384900 83 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 RNU6-1248P-201ENST00000391096 64 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 RNU4-30P-201ENST00000410245 143 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 FCF1P9-201ENST00000412546 282 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 RNU7-73P-201ENST00000458743 63 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 SNORD92-201ENST00000585078 85 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 AP000942.4-201ENST00000604811 241 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.03□□□□□ -2.4
RAB4AP20338 MIR6788-201ENST00000618842 66 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.4
RAB4AP20338 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
RAB4AP20338 Y_RNA.259-201ENST00000364619 101 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNA5SP117-201ENST00000365294 118 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 Y_RNA.383-201ENST00000383855 97 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNU6-1040P-201ENST00000383974 107 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 Y_RNA.428-201ENST00000384078 102 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 MTCO1P5-201ENST00000433573 344 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 POLR2KP2-201ENST00000438155 177 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNU7-53P-201ENST00000516705 60 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNU7-156P-201ENST00000517214 74 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 AL121655.1-201ENST00000605811 308 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 Z97988.1-201ENST00000637697 135 ntBASIC0.02□□□□□ -2.41
RAB4AP20338 RNU4-80P-201ENST00000363200 141 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNU6-1099P-201ENST00000363533 107 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNY3-201ENST00000365484 102 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 SNORD63-201ENST00000384262 68 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 Y_RNA.494-201ENST00000384432 111 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNU6-876P-201ENST00000391295 104 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 FGF7P6-202ENST00000451282 293 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNU7-149P-201ENST00000516739 59 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNU6-448P-201ENST00000517052 107 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 SNORD116.3-201ENST00000517176 78 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.01□□□□□ -2.41
RAB4AP20338 MIR3678-201ENST00000578455 94 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RPS29P30-201ENST00000600975 111 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 AC022140.2-201ENST00000623500 188 ntBASIC0.01□□□□□ -2.41
RAB4AP20338 RNU6-801P-201ENST00000364087 105 ntBASIC0□□□□□ -2.41
RAB4AP20338 Y_RNA.458-201ENST00000384240 102 ntBASIC0□□□□□ -2.41
RAB4AP20338 Y_RNA.474-201ENST00000384341 102 ntBASIC0□□□□□ -2.41
RAB4AP20338 RNU6-913P-201ENST00000390913 95 ntBASIC0□□□□□ -2.41
RAB4AP20338 SNORA26.5-201ENST00000391215 123 ntBASIC0□□□□□ -2.41
RAB4AP20338 MIR1276-201ENST00000408707 83 ntBASIC0□□□□□ -2.41
RAB4AP20338 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
RAB4AP20338 AC087499.4-201ENST00000448505 178 ntBASIC0□□□□□ -2.41
RAB4AP20338 RNU6-1170P-201ENST00000515974 106 ntBASIC0□□□□□ -2.41
RAB4AP20338 Y_RNA.713-201ENST00000517013 96 ntBASIC0□□□□□ -2.41
RAB4AP20338 AL138825.1-201ENST00000618587 192 ntBASIC0□□□□□ -2.41
RAB4AP20338 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 SNORD115-28-201ENST00000363931 81 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 RNU6-899P-201ENST00000363947 107 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 SNORA1.1-201ENST00000364671 133 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 RNU6-937P-201ENST00000384325 106 ntBASIC-0.01□□□□□ -2.41
RAB4AP20338 MT-TF-201ENST00000387314 71 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms