Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 RNU6-396P-201ENST00000365369 105 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 SNORD28B-201ENST00000390993 75 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 MIR1302-7-201ENST00000408841 72 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
XRCC1P18887 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 MTND4P19-201ENST00000446659 478 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 MTND4LP30-201ENST00000454092 297 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 Y_RNA.639-201ENST00000458981 102 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 SNORD11-201ENST00000459124 84 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 Y_RNA.721-201ENST00000517207 102 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 AC005357.1-201ENST00000588399 301 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 AC124312.5-201ENST00000604451 268 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 MIR376A1-201ENST00000616574 68 ntBASIC0.64□□□□□ -2.31
XRCC1P18887 RNU4-90P-201ENST00000362773 141 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 SNORA51.10-201ENST00000384418 136 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 SNORD115-46-201ENST00000390982 71 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 MTCO2P33-201ENST00000402100 465 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 RNU6-994P-201ENST00000410507 111 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 RNU2-14P-201ENST00000411053 191 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.63□□□□□ -2.31
XRCC1P18887 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.63□□□□□ -2.31
XRCC1P18887 MIR4300-201ENST00000581016 96 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 MIR6516-201ENST00000630554 81 ntBASIC0.63□□□□□ -2.31
XRCC1P18887 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
XRCC1P18887 RNU6-1048P-201ENST00000364054 107 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 SNORD42.2-201ENST00000365570 69 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 Y_RNA.569-201ENST00000384749 103 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 SNORA26.5-201ENST00000391215 123 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 AL603910.2-201ENST00000407268 136 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 RNU6-847P-201ENST00000411115 108 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.62□□□□□ -2.31
XRCC1P18887 RNU6-496P-201ENST00000516145 99 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 RNU6-1046P-201ENST00000516538 107 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 Y_RNA.715-201ENST00000517082 110 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 C8orf59P2-201ENST00000603441 271 ntBASIC0.62□□□□□ -2.31
XRCC1P18887 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
XRCC1P18887 RNU6-1205P-201ENST00000363625 106 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 Y_RNA.418-201ENST00000384029 102 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 SNORD72-201ENST00000390994 80 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 RNA5SP496-201ENST00000391240 109 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 MIR1278-201ENST00000408753 81 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 MIR1252-201ENST00000408861 65 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 AC107297.1-201ENST00000459991 176 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 RNU6-764P-201ENST00000516396 105 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
XRCC1P18887 Y_RNA.168-201ENST00000363740 102 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 Y_RNA.376-201ENST00000365638 108 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 RNU6-101P-201ENST00000410323 104 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.6□□□□□ -2.31
XRCC1P18887 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 MIR4791-201ENST00000607666 84 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
XRCC1P18887 MIR369-201ENST00000362155 70 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 Y_RNA.380-201ENST00000365663 111 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
XRCC1P18887 SNORA2B-201ENST00000384583 137 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 MT-TN-201ENST00000387400 73 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU6-823P-201ENST00000391042 103 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 Y_RNA.602-201ENST00000410535 92 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 HSPE1P25-201ENST00000455484 251 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 AC098869.1-201ENST00000481627 292 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU2-13P-201ENST00000515909 113 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU4-57P-201ENST00000515980 135 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU6-897P-201ENST00000517135 105 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.59□□□□□ -2.31
XRCC1P18887 AP001094.1-201ENST00000579805 193 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 AL512605.2-201ENST00000592972 256 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 7SK.10-201ENST00000621414 298 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 AC022140.2-201ENST00000623500 188 ntBASIC0.59□□□□□ -2.31
XRCC1P18887 MIR377-201ENST00000362145 69 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 Y_RNA.14-201ENST00000362415 103 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 Y_RNA.28-201ENST00000362554 111 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 RNU6-654P-201ENST00000364373 107 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 Y_RNA.813-201ENST00000364639 102 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 MIR598-201ENST00000384868 97 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 RNU6-763P-201ENST00000390865 106 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 Y_RNA.581-201ENST00000391017 97 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 Y_RNA.645-201ENST00000391229 102 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 MTCO1P5-201ENST00000433573 344 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 RNU6-988P-201ENST00000519081 107 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 AC037487.3-201ENST00000606668 112 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 AC013791.1-201ENST00000616619 62 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms