Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 Y_RNA.370-201ENST00000365589 108 ntBASIC0.82□□□□□ -2.28
VIMP08670 SNORA51.10-201ENST00000384418 136 ntBASIC0.82□□□□□ -2.28
VIMP08670 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.82□□□□□ -2.28
VIMP08670 MIR5692C2-201ENST00000577959 77 ntBASIC0.82□□□□□ -2.28
VIMP08670 AC113195.1-201ENST00000579952 141 ntBASIC0.82□□□□□ -2.28
VIMP08670 MIR3171-201ENST00000584270 74 ntBASIC0.82□□□□□ -2.28
VIMP08670 AC012433.1-201ENST00000588916 398 ntBASIC0.82□□□□□ -2.28
VIMP08670 Y_RNA.26-201ENST00000362539 101 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNA5SP99-201ENST00000364020 114 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNU6-326P-201ENST00000365480 107 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNU6-514P-201ENST00000384208 107 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNU6-662P-201ENST00000384253 104 ntBASIC0.81□□□□□ -2.28
VIMP08670 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
VIMP08670 SNORA53-201ENST00000391141 249 ntBASIC0.81□□□□□ -2.28
VIMP08670 SNORD111-201ENST00000408139 94 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNA5SP95-201ENST00000410319 137 ntBASIC0.81□□□□□ -2.28
VIMP08670 BTF3P11-201ENST00000426582 477 ntBASIC0.81□□□□□ -2.28
VIMP08670 AC005534.2-201ENST00000431047 433 ntBASIC0.81□□□□□ -2.28
VIMP08670 MTND4LP30-201ENST00000454092 297 ntBASIC0.81□□□□□ -2.28
VIMP08670 AC091959.1-201ENST00000495857 238 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
VIMP08670 RNU7-149P-201ENST00000516739 59 ntBASIC0.81□□□□□ -2.28
VIMP08670 AL049861.1-201ENST00000603130 150 ntBASIC0.81□□□□□ -2.28
VIMP08670 AL355297.3-201ENST00000604082 446 ntBASIC0.81□□□□□ -2.28
VIMP08670 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
VIMP08670 AL021707.8-201ENST00000609428 183 ntBASIC0.81□□□□□ -2.28
VIMP08670 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
VIMP08670 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
VIMP08670 Y_RNA.14-201ENST00000362415 103 ntBASIC0.8□□□□□ -2.28
VIMP08670 SNORD113.3-201ENST00000364630 78 ntBASIC0.8□□□□□ -2.28
VIMP08670 SNORA1.2-201ENST00000365189 134 ntBASIC0.8□□□□□ -2.28
VIMP08670 Y_RNA.537-201ENST00000384626 109 ntBASIC0.8□□□□□ -2.28
VIMP08670 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
VIMP08670 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
VIMP08670 COX6CP14-201ENST00000469580 174 ntBASIC0.8□□□□□ -2.28
VIMP08670 RNU7-25P-201ENST00000516544 62 ntBASIC0.8□□□□□ -2.28
VIMP08670 AC020661.2-201ENST00000560114 134 ntBASIC0.8□□□□□ -2.28
VIMP08670 MIR548AO-201ENST00000579992 96 ntBASIC0.8□□□□□ -2.28
VIMP08670 MIR4680-201ENST00000580906 66 ntBASIC0.8□□□□□ -2.28
VIMP08670 AC037487.3-201ENST00000606668 112 ntBASIC0.8□□□□□ -2.28
VIMP08670 MIR4791-201ENST00000607666 84 ntBASIC0.8□□□□□ -2.28
VIMP08670 uc_338.4-201ENST00000616635 176 ntBASIC0.8□□□□□ -2.28
VIMP08670 MTND1P7-201ENST00000632801 297 ntBASIC0.8□□□□□ -2.28
VIMP08670 MIR367-201ENST00000362299 68 ntBASIC0.79□□□□□ -2.28
VIMP08670 Y_RNA.64-201ENST00000362845 102 ntBASIC0.79□□□□□ -2.28
VIMP08670 Y_RNA.276-201ENST00000364732 109 ntBASIC0.79□□□□□ -2.28
VIMP08670 Y_RNA.293-201ENST00000364908 93 ntBASIC0.79□□□□□ -2.28
VIMP08670 RNU6-392P-201ENST00000364926 101 ntBASIC0.79□□□□□ -2.28
VIMP08670 SNORA2B-201ENST00000384583 137 ntBASIC0.79□□□□□ -2.28
VIMP08670 MIR548O-201ENST00000408583 114 ntBASIC0.79□□□□□ -2.28
VIMP08670 RNU6-613P-201ENST00000410412 108 ntBASIC0.79□□□□□ -2.28
VIMP08670 RNU6-994P-201ENST00000410507 111 ntBASIC0.79□□□□□ -2.28
VIMP08670 MIR2115-201ENST00000516657 100 ntBASIC0.79□□□□□ -2.28
VIMP08670 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.79□□□□□ -2.28
VIMP08670 MIR4724-201ENST00000579485 89 ntBASIC0.79□□□□□ -2.28
VIMP08670 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
VIMP08670 7SK.10-201ENST00000621414 298 ntBASIC0.79□□□□□ -2.28
VIMP08670 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.79□□□□□ -2.28
VIMP08670 RNU6-396P-201ENST00000365369 105 ntBASIC0.78□□□□□ -2.28
VIMP08670 Y_RNA.547-201ENST00000384654 119 ntBASIC0.78□□□□□ -2.28
VIMP08670 RNA5SP496-201ENST00000391240 109 ntBASIC0.78□□□□□ -2.28
VIMP08670 AC067940.1-201ENST00000458411 300 ntBASIC0.78□□□□□ -2.28
VIMP08670 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.78□□□□□ -2.28
VIMP08670 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
VIMP08670 RNU2-13P-201ENST00000515909 113 ntBASIC0.78□□□□□ -2.28
VIMP08670 SCARNA8-201ENST00000515924 131 ntBASIC0.78□□□□□ -2.28
VIMP08670 AP003733.2-201ENST00000529409 171 ntBASIC0.78□□□□□ -2.28
VIMP08670 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
VIMP08670 Y_RNA.16-201ENST00000362421 102 ntBASIC0.77□□□□□ -2.29
VIMP08670 Y_RNA.152-201ENST00000363578 100 ntBASIC0.77□□□□□ -2.29
VIMP08670 Y_RNA.217-201ENST00000364214 105 ntBASIC0.77□□□□□ -2.29
VIMP08670 RNU6-847P-201ENST00000411115 108 ntBASIC0.77□□□□□ -2.29
VIMP08670 Y_RNA.641-201ENST00000459414 105 ntBASIC0.77□□□□□ -2.29
VIMP08670 SNORA27.4-201ENST00000516650 95 ntBASIC0.77□□□□□ -2.29
VIMP08670 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
VIMP08670 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
VIMP08670 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.77□□□□□ -2.29
VIMP08670 AL359821.1-201ENST00000605519 182 ntBASIC0.77□□□□□ -2.29
VIMP08670 AL008718.3-201ENST00000610217 321 ntBASIC0.77□□□□□ -2.29
VIMP08670 AC243994.1-201ENST00000618627 109 ntBASIC0.77□□□□□ -2.29
VIMP08670 RNY1P10-201ENST00000363268 113 ntBASIC0.76□□□□□ -2.29
VIMP08670 Y_RNA.153-201ENST00000363615 91 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-1138P-201ENST00000365359 106 ntBASIC0.76□□□□□ -2.29
VIMP08670 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
VIMP08670 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-1143P-201ENST00000516125 104 ntBASIC0.76□□□□□ -2.29
VIMP08670 Y_RNA.666-201ENST00000516187 112 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-1110P-201ENST00000516462 101 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-113P-201ENST00000516653 101 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-1137P-201ENST00000517073 99 ntBASIC0.76□□□□□ -2.29
VIMP08670 AC025627.3-201ENST00000582078 182 ntBASIC0.76□□□□□ -2.29
VIMP08670 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
VIMP08670 snoU18.1-201ENST00000629629 71 ntBASIC0.76□□□□□ -2.29
VIMP08670 RNU6-797P-201ENST00000363101 109 ntBASIC0.75□□□□□ -2.29
VIMP08670 RNU4-10P-201ENST00000364383 140 ntBASIC0.75□□□□□ -2.29
VIMP08670 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
VIMP08670 SNORD99-201ENST00000408612 74 ntBASIC0.75□□□□□ -2.29
VIMP08670 Y_RNA.604-201ENST00000410574 102 ntBASIC0.75□□□□□ -2.29
VIMP08670 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
VIMP08670 MTND5P22-201ENST00000458380 195 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms