Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU5E-3P-201ENST00000515913 68 ntBASIC2.17□□□□□ -2.06
HLA-DOAP06340 RNU6-659P-201ENST00000516454 104 ntBASIC2.17□□□□□ -2.06
HLA-DOAP06340 RNU6-1116P-201ENST00000517269 99 ntBASIC2.17□□□□□ -2.06
HLA-DOAP06340 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
HLA-DOAP06340 U7.2-201ENST00000607576 63 ntBASIC2.17□□□□□ -2.06
HLA-DOAP06340 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DOAP06340 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DOAP06340 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 MIR548A2-201ENST00000384956 97 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 AC245047.3-201ENST00000429428 127 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DOAP06340 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DOAP06340 SNORA25.15-201ENST00000516487 89 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 RNU6-365P-201ENST00000517113 106 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 AP002004.2-201ENST00000531656 154 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 AC084364.2-201ENST00000546924 395 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 MIR376A2-201ENST00000636782 80 ntBASIC2.16□□□□□ -2.06
HLA-DOAP06340 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DOAP06340 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HLA-DOAP06340 Y_RNA.52-201ENST00000362760 96 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DOAP06340 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DOAP06340 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DOAP06340 HSPE1P9-201ENST00000440046 311 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 SNORA31.10-201ENST00000516482 106 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 AC024995.1-201ENST00000523014 93 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DOAP06340 MIR5194-201ENST00000582634 120 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 AC131055.1-201ENST00000584626 316 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 AL359881.1-201ENST00000602916 267 ntBASIC2.15□□□□□ -2.07
HLA-DOAP06340 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 FTH1P12-201ENST00000432137 551 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 RPS29P11-201ENST00000496507 171 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 RNU6-693P-201ENST00000516134 107 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 SNORA18.4-201ENST00000516440 124 ntBASIC2.14□□□□□ -2.07
HLA-DOAP06340 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
HLA-DOAP06340 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HLA-DOAP06340 SNORA4.2-201ENST00000365313 147 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 MIR518F-201ENST00000384973 87 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 AL627390.1-201ENST00000396055 340 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 RNA5SP501-201ENST00000410990 112 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 Y_RNA.630-201ENST00000411370 108 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 MTATP6P29-201ENST00000415057 132 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 STAG3L5P-204ENST00000443759 179 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 AL358944.1-201ENST00000528537 144 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 MIR4662B-201ENST00000579498 81 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 MIR8054-201ENST00000620877 86 ntBASIC2.13□□□□□ -2.07
HLA-DOAP06340 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HLA-DOAP06340 Y_RNA.114-201ENST00000363265 113 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 Y_RNA.120-201ENST00000363304 110 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 Y_RNA.353-201ENST00000365440 108 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 RNU6-440P-201ENST00000390882 105 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 SNORD77.3-201ENST00000391113 65 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 RNA5SP127-201ENST00000411051 133 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 AF228730.3-201ENST00000436691 102 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 Y_RNA.651-201ENST00000459380 103 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 Y_RNA.690-201ENST00000516603 95 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 RNU6-250P-201ENST00000516958 103 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DOAP06340 MIR3121-201ENST00000579680 77 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 MIR3683-201ENST00000580847 82 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 AL365205.2-201ENST00000594586 68 ntBASIC2.12□□□□□ -2.07
HLA-DOAP06340 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU6-888P-201ENST00000363010 101 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNA5SP393-201ENST00000363423 117 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 Y_RNA.265-201ENST00000364677 108 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 Y_RNA.280-201ENST00000364765 112 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU6-44P-201ENST00000384045 107 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 MIR515-2-201ENST00000384883 83 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 MIR515-1-201ENST00000384884 83 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 MIR624-201ENST00000385217 97 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 SNORA40.5-201ENST00000391061 128 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 SNORA26-201ENST00000391286 122 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 MIR891A-201ENST00000401237 79 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 Y_RNA.629-201ENST00000411368 105 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DOAP06340 SNRPGP14-201ENST00000435400 219 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU7-94P-201ENST00000459576 63 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU6-772P-201ENST00000516042 105 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU7-25P-201ENST00000516544 62 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.11□□□□□ -2.07
HLA-DOAP06340 AP000942.3-201ENST00000603702 160 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 MIR8081-201ENST00000611533 95 ntBASIC2.11□□□□□ -2.07
HLA-DOAP06340 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DOAP06340 RNU6-1084P-201ENST00000362498 107 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 Y_RNA.81-201ENST00000362997 102 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNU6-1019P-201ENST00000364424 107 ntBASIC2.1□□□□□ -2.07
HLA-DOAP06340 RNU6-215P-201ENST00000365169 102 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms