Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 AL603914.1-201ENST00000401964 204 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.28□□□□□ -2.04
ITGB1P05556 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 RNU6-781P-201ENST00000516377 101 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 RNU6-1270P-201ENST00000517128 108 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 MIR6845-201ENST00000613182 61 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
ITGB1P05556 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
ITGB1P05556 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ITGB1P05556 SNORD115-3-201ENST00000363100 82 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 SNORA8-201ENST00000384574 139 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.27□□□□□ -2.05
ITGB1P05556 Y_RNA.709-201ENST00000516952 92 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 AL358944.1-201ENST00000528537 144 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.27□□□□□ -2.05
ITGB1P05556 AC005786.1-201ENST00000588553 154 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 AL365205.2-201ENST00000594586 68 ntBASIC2.27□□□□□ -2.05
ITGB1P05556 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ITGB1P05556 MTND5P32-201ENST00000560711 1802 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 SNORD58C-201ENST00000365223 64 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 SNORD61-201ENST00000384252 73 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 MIR17-201ENST00000385012 84 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 MIR624-201ENST00000385217 97 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 RNA5SP323-201ENST00000391094 133 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 MIR891A-201ENST00000401237 79 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 AL163195.1-201ENST00000496941 348 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 Y_RNA.666-201ENST00000516187 112 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 AP000942.3-201ENST00000603702 160 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.26□□□□□ -2.05
ITGB1P05556 U6.95-201ENST00000636931 70 ntBASIC2.26□□□□□ -2.05
ITGB1P05556 MIR126-201ENST00000362291 85 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNU1-17P-201ENST00000363022 152 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 Y_RNA.338-201ENST00000365320 114 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 SNORA22-201ENST00000383907 134 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 Y_RNA.617-201ENST00000410920 90 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNA5SP247-201ENST00000411181 105 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 Y_RNA.651-201ENST00000459380 103 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNU7-94P-201ENST00000459576 63 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNU6-589P-201ENST00000516485 107 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNU6-504P-201ENST00000516568 104 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 RNU6-126P-201ENST00000516685 103 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 AC008507.4-201ENST00000585464 127 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 AL022345.2-201ENST00000606307 135 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 AL591926.4-201ENST00000616895 298 ntBASIC2.25□□□□□ -2.05
ITGB1P05556 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ITGB1P05556 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ITGB1P05556 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
ITGB1P05556 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ITGB1P05556 SNORA1B-201ENST00000362535 133 ntBASIC2.24□□□□□ -2.05
ITGB1P05556 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
ITGB1P05556 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
ITGB1P05556 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.24□□□□□ -2.05
ITGB1P05556 AC022217.4-201ENST00000604389 163 ntBASIC2.24□□□□□ -2.05
ITGB1P05556 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
ITGB1P05556 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
ITGB1P05556 Y_RNA.4-201ENST00000362333 112 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 RNU6-647P-201ENST00000364243 107 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 MIR548A2-201ENST00000384956 97 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 AP002004.2-201ENST00000531656 154 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.23□□□□□ -2.05
ITGB1P05556 Y_RNA.783-201ENST00000613546 102 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 AC245060.5-201ENST00000610778 3293 ntBASIC2.23□□□□□ -2.05
ITGB1P05556 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ITGB1P05556 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.22□□□□□ -2.05
ITGB1P05556 MIR518A2-201ENST00000384966 87 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 MIR522-201ENST00000385071 87 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 RNA5SP465-201ENST00000391195 109 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 AF228730.3-201ENST00000436691 102 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 AL049830.1-201ENST00000468034 425 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.22□□□□□ -2.05
ITGB1P05556 CYCTP-201ENST00000504253 315 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 RNU6-693P-201ENST00000516134 107 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 RNA5SP236-201ENST00000516169 116 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 IGKV1-22-201ENST00000524313 326 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 AL670379.3-201ENST00000605040 251 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 ZNF355P-201ENST00000427301 3216 ntBASIC2.22□□□□□ -2.05
ITGB1P05556 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ITGB1P05556 Y_RNA.35-201ENST00000362601 101 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 RNU6-888P-201ENST00000363010 101 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 Y_RNA.164-201ENST00000363709 102 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 SNORD24-201ENST00000383884 75 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 MIR583-201ENST00000384846 75 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 MIR548A3-201ENST00000385297 97 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 HMGN2P39-201ENST00000398005 273 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 AL606517.2-201ENST00000442855 241 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 RN7SKP19-201ENST00000516016 252 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
ITGB1P05556 MIR4287-201ENST00000579398 78 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms