Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SNORD81.1-201ENST00000363064 77 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 RNA5SP457-201ENST00000363657 124 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 RNU6-1040P-201ENST00000383974 107 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
MT-ND3P03897 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 AC023449.1-201ENST00000454464 154 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 snoU13.16-201ENST00000459350 104 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
MT-ND3P03897 MIR18A-201ENST00000362310 71 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 SNORA63C-201ENST00000364578 129 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 Y_RNA.387-201ENST00000383918 102 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 SNORD63-201ENST00000384262 68 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 RNU6-21P-201ENST00000384710 107 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 AL355297.3-201ENST00000604082 446 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 MIR4272-201ENST00000635924 64 ntBASIC0.35□□□□□ -2.35
MT-ND3P03897 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 RNU6-205P-201ENST00000390858 107 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 AC015818.7-201ENST00000428754 109 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 AC087499.7-201ENST00000441958 109 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
MT-ND3P03897 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 SNORA62.5-201ENST00000516634 120 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.34□□□□□ -2.36
MT-ND3P03897 AL162730.1-201ENST00000605734 292 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 AC092794.1-201ENST00000612734 582 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.34□□□□□ -2.36
MT-ND3P03897 SNORD45.3-201ENST00000363836 72 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 Y_RNA.384-201ENST00000383909 102 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 Y_RNA.526-201ENST00000384572 110 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 Y_RNA.551-201ENST00000384661 102 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 SNORD72-201ENST00000390994 80 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
MT-ND3P03897 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
MT-ND3P03897 Y_RNA.439-201ENST00000384119 94 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 AL603910.2-201ENST00000407268 136 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 SNORD83.1-201ENST00000411362 77 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 AC098614.3-201ENST00000438957 440 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.32□□□□□ -2.36
MT-ND3P03897 SNORD11-201ENST00000459124 84 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 RNU7-141P-201ENST00000459304 62 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 snoU13.21-201ENST00000459368 105 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.32□□□□□ -2.36
MT-ND3P03897 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 AC092634.7-201ENST00000621022 103 ntBASIC0.32□□□□□ -2.36
MT-ND3P03897 Y_RNA.39-201ENST00000362620 98 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 Y_RNA.248-201ENST00000364501 109 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 Y_RNA.458-201ENST00000384240 102 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 RNU6-125P-201ENST00000384505 107 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 RNY4P36-201ENST00000391116 96 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 AL358176.2-201ENST00000425769 204 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.31□□□□□ -2.36
MT-ND3P03897 Y_RNA.115-201ENST00000363272 98 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 RNU4-50P-201ENST00000364361 141 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 RNY3-201ENST00000365484 102 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 SNORA72.4-201ENST00000384174 132 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 Y_RNA.463-201ENST00000384271 102 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 U8.20-201ENST00000459445 131 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 SNORA40.14-201ENST00000516543 86 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.3□□□□□ -2.36
MT-ND3P03897 MIR4676-201ENST00000583078 72 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.3□□□□□ -2.36
MT-ND3P03897 MTND4LP32-201ENST00000636111 270 ntBASIC0.3□□□□□ -2.36
MT-ND3P03897 Y_RNA.85-201ENST00000363014 111 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 SNORA24-201ENST00000384096 131 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 POLR2KP2-201ENST00000438155 177 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 RNU7-62P-201ENST00000458856 62 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 SEPT14P8-201ENST00000508026 178 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 MIR3145-201ENST00000580727 82 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 LARP7P1-201ENST00000605576 316 ntBASIC0.29□□□□□ -2.36
MT-ND3P03897 Y_RNA.258-201ENST00000364613 105 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 RNU6-716P-201ENST00000365621 103 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 Y_RNA.383-201ENST00000383855 97 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 RNU6-144P-201ENST00000383951 107 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 MIR1278-201ENST00000408753 81 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 RNU7-56P-201ENST00000458744 62 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 RNU7-67P-201ENST00000459003 62 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 Y_RNA.718-201ENST00000517110 102 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 AC005357.1-201ENST00000588399 301 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 AC134878.1-201ENST00000619901 243 ntBASIC0.28□□□□□ -2.36
MT-ND3P03897 SNORD115-34-201ENST00000362441 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-12-201ENST00000362583 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-29-201ENST00000362834 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-9-201ENST00000362912 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-21-201ENST00000362963 81 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-14-201ENST00000363090 81 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-13-201ENST00000363358 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-41-201ENST00000363608 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-11-201ENST00000363616 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-5-201ENST00000363633 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-39-201ENST00000363694 82 ntBASIC0.27□□□□□ -2.37
MT-ND3P03897 SNORD115-4-201ENST00000363810 82 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms