Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SNORD110-201ENST00000408189 75 ntBASIC-1.04□□□□□ -2.58
APOC1P02654 RPL39P25-201ENST00000449384 154 ntBASIC-1.04□□□□□ -2.58
APOC1P02654 SNORD42A-201ENST00000459584 64 ntBASIC-1.04□□□□□ -2.58
APOC1P02654 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.04□□□□□ -2.58
APOC1P02654 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
APOC1P02654 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 RNU6-595P-201ENST00000363944 107 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 RNU6-879P-201ENST00000364328 108 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 RNU6-938P-201ENST00000411285 103 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 AL353193.1-201ENST00000421444 268 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 USMG5P1-201ENST00000425964 177 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 USP9YP30-201ENST00000430729 455 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 AC083904.1-201ENST00000487828 231 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 ACA59.1-201ENST00000515966 143 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 SNORA25.13-201ENST00000516395 103 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 AC073869.9-201ENST00000641610 120 ntBASIC-1.05□□□□□ -2.58
APOC1P02654 RNU6-874P-201ENST00000362390 105 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 RNU4-75P-201ENST00000364621 146 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 AC006210.1-201ENST00000424882 111 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 RNA5SP484-201ENST00000458857 111 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 RNU7-104P-201ENST00000459398 79 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.06□□□□□ -2.58
APOC1P02654 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.06□□□□□ -2.58
APOC1P02654 AP003072.1-201ENST00000531740 145 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 MIR4636-201ENST00000582271 80 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 AL158050.2-201ENST00000605336 568 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 AC092954.2-201ENST00000609103 430 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 AC004223.4-201ENST00000612426 332 ntBASIC-1.06□□□□□ -2.58
APOC1P02654 RNU4-73P-201ENST00000363164 141 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RNU6-254P-201ENST00000363377 107 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RNU6-865P-201ENST00000364772 107 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 MIR548O-201ENST00000408583 114 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RPL30P15-201ENST00000457129 321 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 RNA5SP401-201ENST00000515920 127 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 AC007751.1-201ENST00000529260 376 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 AC060780.3-201ENST00000589464 80 ntBASIC-1.07□□□□□ -2.58
APOC1P02654 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 RNU6-961P-201ENST00000363893 105 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 RNU6-522P-201ENST00000364497 107 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 SNORD37.1-201ENST00000390968 65 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 SNORD41.1-201ENST00000391000 69 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.08□□□□□ -2.58
APOC1P02654 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 MIR5188-201ENST00000583467 113 ntBASIC-1.08□□□□□ -2.58
APOC1P02654 RNU6-702P-201ENST00000364982 107 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 SNORA72.3-201ENST00000365074 132 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 MTND3P7-201ENST00000474435 343 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 RNU6-436P-201ENST00000516171 114 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 RNU7-53P-201ENST00000516705 60 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 RNU7-188P-201ENST00000517063 64 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 AP003461.1-201ENST00000528866 78 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 AC093726.3-201ENST00000637588 150 ntBASIC-1.09□□□□□ -2.58
APOC1P02654 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 RNU6-306P-201ENST00000384617 107 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 RNU6-455P-201ENST00000384681 107 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 MIR224-201ENST00000384889 81 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 SNORA26.6-201ENST00000391256 115 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 MIR548I3-201ENST00000408378 149 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 RNA5SP237-201ENST00000410414 113 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 Z95118.1-201ENST00000421372 247 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 SNORD11-201ENST00000459124 84 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 RNU6-408P-201ENST00000515910 100 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 AC141846.1-201ENST00000568348 142 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 AC019193.3-201ENST00000609144 554 ntBASIC-1.1□□□□□ -2.59
APOC1P02654 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNA5SP403-201ENST00000363598 108 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-47P-201ENST00000383866 107 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-128P-201ENST00000383976 107 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 MIR196A1-201ENST00000388006 70 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 MTCO2P19-201ENST00000427513 598 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 MTATP6P17-201ENST00000431030 672 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 AL445193.1-201ENST00000441183 141 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 AC244505.6-201ENST00000452829 130 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU7-87P-201ENST00000459343 62 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU7-45P-201ENST00000459460 63 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RPS29P24-201ENST00000486345 171 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-758P-201ENST00000516292 89 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOC1P02654 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOC1P02654 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOC1P02654 AL356055.1-201ENST00000602528 446 ntBASIC-1.11□□□□□ -2.59
APOC1P02654 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms