Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR5188-201ENST00000583467 113 ntBASIC-0.7□□□□□ -2.52
APOEP02649 MIR6128-201ENST00000615528 109 ntBASIC-0.7□□□□□ -2.52
APOEP02649 AC244669.1-204ENST00000621564 178 ntBASIC-0.7□□□□□ -2.52
APOEP02649 RNU6-46P-201ENST00000383860 107 ntBASIC-0.71□□□□□ -2.52
APOEP02649 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.71□□□□□ -2.52
APOEP02649 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.71□□□□□ -2.52
APOEP02649 RNU6-332P-201ENST00000391193 108 ntBASIC-0.71□□□□□ -2.52
APOEP02649 RNU7-73P-201ENST00000458743 63 ntBASIC-0.71□□□□□ -2.52
APOEP02649 RNU6-135P-201ENST00000516769 101 ntBASIC-0.71□□□□□ -2.52
APOEP02649 AL512360.1-201ENST00000555346 234 ntBASIC-0.71□□□□□ -2.52
APOEP02649 MIR4639-201ENST00000584938 69 ntBASIC-0.71□□□□□ -2.52
APOEP02649 AP003357.1-201ENST00000604497 148 ntBASIC-0.71□□□□□ -2.52
APOEP02649 AC018462.2-201ENST00000605375 395 ntBASIC-0.71□□□□□ -2.52
APOEP02649 AC011921.3-201ENST00000605540 361 ntBASIC-0.71□□□□□ -2.52
APOEP02649 MIR8064-201ENST00000612863 90 ntBASIC-0.71□□□□□ -2.52
APOEP02649 SNORD115-34-201ENST00000362441 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-12-201ENST00000362583 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-29-201ENST00000362834 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-9-201ENST00000362912 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-21-201ENST00000362963 81 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-14-201ENST00000363090 81 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-13-201ENST00000363358 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-41-201ENST00000363608 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-11-201ENST00000363616 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-5-201ENST00000363633 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-39-201ENST00000363694 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-4-201ENST00000363810 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-16-201ENST00000363887 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-6-201ENST00000363942 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-42-201ENST00000364273 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-15-201ENST00000364809 81 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-1-201ENST00000364961 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-26-201ENST00000365067 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-10-201ENST00000365073 81 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-43-201ENST00000365503 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-36-201ENST00000365629 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 MIR196A2-201ENST00000385189 110 ntBASIC-0.72□□□□□ -2.52
APOEP02649 RNU6-180P-201ENST00000516697 61 ntBASIC-0.72□□□□□ -2.52
APOEP02649 AC006600.1-201ENST00000572529 153 ntBASIC-0.72□□□□□ -2.52
APOEP02649 SNORD115-40-201ENST00000606510 82 ntBASIC-0.72□□□□□ -2.52
APOEP02649 MIR3666-201ENST00000607845 111 ntBASIC-0.72□□□□□ -2.52
APOEP02649 MIR548AZ-201ENST00000616567 95 ntBASIC-0.72□□□□□ -2.52
APOEP02649 RNU6-403P-201ENST00000363163 104 ntBASIC-0.73□□□□□ -2.53
APOEP02649 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.73□□□□□ -2.53
APOEP02649 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.73□□□□□ -2.53
APOEP02649 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.73□□□□□ -2.53
APOEP02649 RNA5SP300-201ENST00000391197 107 ntBASIC-0.73□□□□□ -2.53
APOEP02649 FTX_2.1-201ENST00000618816 94 ntBASIC-0.73□□□□□ -2.53
APOEP02649 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.74□□□□□ -2.53
APOEP02649 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.74□□□□□ -2.53
APOEP02649 MTCO3P40-201ENST00000392516 676 ntBASIC-0.74□□□□□ -2.53
APOEP02649 AL138752.1-201ENST00000452964 351 ntBASIC-0.74□□□□□ -2.53
APOEP02649 RPL30P15-201ENST00000457129 321 ntBASIC-0.74□□□□□ -2.53
APOEP02649 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.74□□□□□ -2.53
APOEP02649 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.74□□□□□ -2.53
APOEP02649 AC127455.1-201ENST00000565496 145 ntBASIC-0.74□□□□□ -2.53
APOEP02649 AP000942.4-201ENST00000604811 241 ntBASIC-0.74□□□□□ -2.53
APOEP02649 AL442067.1-201ENST00000613261 223 ntBASIC-0.74□□□□□ -2.53
APOEP02649 MIR6082-201ENST00000613604 109 ntBASIC-0.74□□□□□ -2.53
APOEP02649 uc_338.36-201ENST00000622331 158 ntBASIC-0.74□□□□□ -2.53
APOEP02649 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.75□□□□□ -2.53
APOEP02649 RNU6-780P-201ENST00000391030 104 ntBASIC-0.75□□□□□ -2.53
APOEP02649 RNU6-908P-201ENST00000410160 94 ntBASIC-0.75□□□□□ -2.53
APOEP02649 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.75□□□□□ -2.53
APOEP02649 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.75□□□□□ -2.53
APOEP02649 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.75□□□□□ -2.53
APOEP02649 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.75□□□□□ -2.53
APOEP02649 RNU2-60P-201ENST00000517290 128 ntBASIC-0.75□□□□□ -2.53
APOEP02649 MIR4493-201ENST00000584016 73 ntBASIC-0.75□□□□□ -2.53
APOEP02649 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.75□□□□□ -2.53
APOEP02649 MIR548AD-201ENST00000584780 82 ntBASIC-0.75□□□□□ -2.53
APOEP02649 MIR101-1-201ENST00000362265 75 ntBASIC-0.76□□□□□ -2.53
APOEP02649 RNU6-291P-201ENST00000384720 107 ntBASIC-0.76□□□□□ -2.53
APOEP02649 SNORA32.3-201ENST00000384772 121 ntBASIC-0.76□□□□□ -2.53
APOEP02649 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
APOEP02649 AL590004.1-201ENST00000405321 300 ntBASIC-0.76□□□□□ -2.53
APOEP02649 MIR548O-201ENST00000408583 114 ntBASIC-0.76□□□□□ -2.53
APOEP02649 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.76□□□□□ -2.53
APOEP02649 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.76□□□□□ -2.53
APOEP02649 RNU6-470P-201ENST00000515954 104 ntBASIC-0.76□□□□□ -2.53
APOEP02649 RNU7-115P-201ENST00000516433 55 ntBASIC-0.76□□□□□ -2.53
APOEP02649 AL162413.1-201ENST00000603198 110 ntBASIC-0.76□□□□□ -2.53
APOEP02649 AL133255.1-201ENST00000606374 441 ntBASIC-0.76□□□□□ -2.53
APOEP02649 AC024933.1-201ENST00000608472 348 ntBASIC-0.76□□□□□ -2.53
APOEP02649 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.77□□□□□ -2.53
APOEP02649 RNU6-483P-201ENST00000384088 108 ntBASIC-0.77□□□□□ -2.53
APOEP02649 RNU6-20P-201ENST00000384106 107 ntBASIC-0.77□□□□□ -2.53
APOEP02649 AC087499.4-201ENST00000448505 178 ntBASIC-0.77□□□□□ -2.53
APOEP02649 AC131281.1-201ENST00000522984 164 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR3925-201ENST00000584674 77 ntBASIC-0.77□□□□□ -2.53
APOEP02649 AC119751.7-201ENST00000600494 245 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR1244-1-201ENST00000612829 85 ntBASIC-0.77□□□□□ -2.53
APOEP02649 AL359880.1-201ENST00000621879 266 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR6514-201ENST00000622549 70 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR1244-3-201ENST00000635744 85 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR1244-2-201ENST00000636449 85 ntBASIC-0.77□□□□□ -2.53
APOEP02649 MIR1244-4-202ENST00000636813 85 ntBASIC-0.77□□□□□ -2.53
APOEP02649 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNA5SP98-201ENST00000363158 137 ntBASIC-0.78□□□□□ -2.53
APOEP02649 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms