Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC011373.1-201ENST00000607270 237 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 AC104465.1-201ENST00000611365 139 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 U6atac.1-201ENST00000616025 117 ntBASIC0.27□□□□□ -2.37
COL4A1P02462 Y_RNA.143-201ENST00000363520 106 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 RNU6-674P-201ENST00000363831 107 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 Y_RNA.331-201ENST00000365267 102 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 Y_RNA.494-201ENST00000384432 111 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 RNU6-876P-201ENST00000391295 104 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 SNORA75.6-201ENST00000391318 127 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 RPS3AP1-201ENST00000413190 320 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 MTND1P14-201ENST00000427400 950 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 SNRPGP14-201ENST00000435400 219 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC098614.3-201ENST00000438957 440 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC099799.1-201ENST00000439809 192 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 CHEK2P4-201ENST00000450340 246 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 MTND4P17-201ENST00000470444 350 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 RNU7-181P-201ENST00000517234 74 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC011195.1-201ENST00000578177 177 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC006441.5-201ENST00000612680 209 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC010205.1-201ENST00000616668 449 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
COL4A1P02462 Y_RNA.383-201ENST00000383855 97 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 SNORD28B-201ENST00000390993 75 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC024067.1-201ENST00000426199 223 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 Y_RNA.635-201ENST00000459041 101 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.25□□□□□ -2.37
COL4A1P02462 RNU6-830P-201ENST00000516353 107 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC024405.2-202ENST00000532731 184 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 Y_RNA.772-201ENST00000606692 102 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC006157.1-201ENST00000611750 366 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC133104.2-201ENST00000615272 193 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 AC090971.5-201ENST00000621102 293 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 MTND4LP32-201ENST00000636111 270 ntBASIC0.25□□□□□ -2.37
COL4A1P02462 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
COL4A1P02462 RNU6-1209P-201ENST00000363655 107 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.160-201ENST00000363677 92 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-654P-201ENST00000364373 107 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.463-201ENST00000384271 102 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MT-TN-201ENST00000387400 73 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-1248P-201ENST00000391096 64 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MTCO2P33-201ENST00000402100 465 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MIR1278-201ENST00000408753 81 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.24□□□□□ -2.37
COL4A1P02462 MTND1P4-201ENST00000435196 415 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AC023449.1-201ENST00000454464 154 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 SEPT14P8-201ENST00000508026 178 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-277P-201ENST00000516272 106 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-958P-201ENST00000516995 106 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.24□□□□□ -2.37
COL4A1P02462 SNORD58B-201ENST00000607313 66 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AC022140.2-201ENST00000623500 188 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MTND1P7-201ENST00000632801 297 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MIR4251-201ENST00000635819 61 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.197-201ENST00000364004 102 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.222-201ENST00000364264 102 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.248-201ENST00000364501 109 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-923P-201ENST00000364753 107 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-144P-201ENST00000383951 107 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.496-201ENST00000384444 101 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.570-201ENST00000384750 101 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 SNORA36B-201ENST00000410438 131 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU2-14P-201ENST00000411053 191 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 SCARNA8-201ENST00000515924 131 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-764P-201ENST00000516396 105 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RNU6-977P-201ENST00000516411 103 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 SNORA40.14-201ENST00000516543 86 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AC100767.1-201ENST00000528178 123 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 RPL23AP91-201ENST00000569211 455 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 MIR4300-201ENST00000581016 96 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 uc_338.4-201ENST00000616635 176 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 AC104985.2-201ENST00000620598 500 ntBASIC0.24□□□□□ -2.37
COL4A1P02462 Y_RNA.259-201ENST00000364619 101 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
COL4A1P02462 RNU6-890P-201ENST00000384121 107 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 SNORD38B-201ENST00000384690 67 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 MIR559-201ENST00000385188 96 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 RNU2-13P-201ENST00000515909 113 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 RNU7-4P-201ENST00000516961 62 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 MIR5692C2-201ENST00000577959 77 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 AC092447.9-201ENST00000603395 144 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 MIR4791-201ENST00000607666 84 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 AL132765.2-201ENST00000610812 351 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 AL136317.1-201ENST00000612653 226 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 SNORD38B-202ENST00000625943 69 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 AL606534.2-204ENST00000635008 178 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 U6.92-201ENST00000636464 89 ntBASIC0.23□□□□□ -2.37
COL4A1P02462 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
COL4A1P02462 RNU4-73P-201ENST00000363164 141 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 Y_RNA.242-201ENST00000364473 110 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 SNORA1.2-201ENST00000365189 134 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 SNORD14.1-201ENST00000365609 90 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 Y_RNA.384-201ENST00000383909 102 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 SNORA40.5-201ENST00000391061 128 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms