Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR335-201ENST00000362173 94 ntBASIC-1.1□□□□□ -2.59
TNFP01375 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.1□□□□□ -2.59
TNFP01375 RNU6-704P-201ENST00000364162 103 ntBASIC-1.1□□□□□ -2.59
TNFP01375 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.1□□□□□ -2.59
TNFP01375 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.1□□□□□ -2.59
TNFP01375 MIR601-201ENST00000385256 79 ntBASIC-1.1□□□□□ -2.59
TNFP01375 RNU6-131P-201ENST00000391144 107 ntBASIC-1.1□□□□□ -2.59
TNFP01375 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
TNFP01375 MTCYBP4-201ENST00000401524 249 ntBASIC-1.1□□□□□ -2.59
TNFP01375 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.1□□□□□ -2.59
TNFP01375 RNU6-592P-201ENST00000411333 103 ntBASIC-1.1□□□□□ -2.59
TNFP01375 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.1□□□□□ -2.59
TNFP01375 AC079140.5-201ENST00000507882 310 ntBASIC-1.1□□□□□ -2.59
TNFP01375 RNU6-983P-201ENST00000516004 103 ntBASIC-1.1□□□□□ -2.59
TNFP01375 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.1□□□□□ -2.59
TNFP01375 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.1□□□□□ -2.59
TNFP01375 UBL5P4-201ENST00000562584 236 ntBASIC-1.1□□□□□ -2.59
TNFP01375 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.1□□□□□ -2.59
TNFP01375 AC064836.2-201ENST00000609491 462 ntBASIC-1.1□□□□□ -2.59
TNFP01375 AC091912.2-201ENST00000624798 167 ntBASIC-1.1□□□□□ -2.59
TNFP01375 U6.115-201ENST00000636045 103 ntBASIC-1.1□□□□□ -2.59
TNFP01375 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.1□□□□□ -2.59
TNFP01375 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
TNFP01375 RNA5SP26-201ENST00000362406 119 ntBASIC-1.11□□□□□ -2.59
TNFP01375 RNU6-228P-201ENST00000362700 106 ntBASIC-1.11□□□□□ -2.59
TNFP01375 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.11□□□□□ -2.59
TNFP01375 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.11□□□□□ -2.59
TNFP01375 RNU6-154P-201ENST00000384306 106 ntBASIC-1.11□□□□□ -2.59
TNFP01375 MIR527-201ENST00000385244 85 ntBASIC-1.11□□□□□ -2.59
TNFP01375 RNU6-466P-201ENST00000391224 103 ntBASIC-1.11□□□□□ -2.59
TNFP01375 AL606845.1-201ENST00000404881 255 ntBASIC-1.11□□□□□ -2.59
TNFP01375 SNX3P1X-201ENST00000414887 175 ntBASIC-1.11□□□□□ -2.59
TNFP01375 RPL30P16-201ENST00000419341 429 ntBASIC-1.11□□□□□ -2.59
TNFP01375 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.11□□□□□ -2.59
TNFP01375 AC236972.2-201ENST00000434979 310 ntBASIC-1.11□□□□□ -2.59
TNFP01375 Z82188.1-201ENST00000436709 154 ntBASIC-1.11□□□□□ -2.59
TNFP01375 AC112204.1-201ENST00000502591 103 ntBASIC-1.11□□□□□ -2.59
TNFP01375 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.11□□□□□ -2.59
TNFP01375 AC245505.1-201ENST00000556398 224 ntBASIC-1.11□□□□□ -2.59
TNFP01375 MIR3684-201ENST00000579779 74 ntBASIC-1.11□□□□□ -2.59
TNFP01375 AC018714.1-201ENST00000605028 208 ntBASIC-1.11□□□□□ -2.59
TNFP01375 AL512427.1-201ENST00000618593 349 ntBASIC-1.11□□□□□ -2.59
TNFP01375 U6.114-201ENST00000636407 96 ntBASIC-1.11□□□□□ -2.59
TNFP01375 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.12□□□□□ -2.59
TNFP01375 RNY3-201ENST00000365484 102 ntBASIC-1.12□□□□□ -2.59
TNFP01375 MIR582-201ENST00000365731 98 ntBASIC-1.12□□□□□ -2.59
TNFP01375 RNU6-746P-201ENST00000384112 109 ntBASIC-1.12□□□□□ -2.59
TNFP01375 RNU6-159P-201ENST00000391080 106 ntBASIC-1.12□□□□□ -2.59
TNFP01375 AL008987.1-201ENST00000415528 237 ntBASIC-1.12□□□□□ -2.59
TNFP01375 AC073464.1-201ENST00000429823 534 ntBASIC-1.12□□□□□ -2.59
TNFP01375 RNU6-720P-201ENST00000516363 108 ntBASIC-1.12□□□□□ -2.59
TNFP01375 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
TNFP01375 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.12□□□□□ -2.59
TNFP01375 SCOCP1-201ENST00000554676 349 ntBASIC-1.12□□□□□ -2.59
TNFP01375 YWHAEP2-201ENST00000580066 112 ntBASIC-1.12□□□□□ -2.59
TNFP01375 MIR4464-201ENST00000580818 92 ntBASIC-1.12□□□□□ -2.59
TNFP01375 MIR4441-201ENST00000582623 100 ntBASIC-1.12□□□□□ -2.59
TNFP01375 AC027449.1-201ENST00000608890 407 ntBASIC-1.12□□□□□ -2.59
TNFP01375 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.13□□□□□ -2.59
TNFP01375 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.13□□□□□ -2.59
TNFP01375 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU6-268P-201ENST00000364174 107 ntBASIC-1.13□□□□□ -2.59
TNFP01375 SNORD114-29-201ENST00000364819 70 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU6-533P-201ENST00000384144 107 ntBASIC-1.13□□□□□ -2.59
TNFP01375 MIR29B1-201ENST00000385015 81 ntBASIC-1.13□□□□□ -2.59
TNFP01375 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
TNFP01375 RNU2-29P-201ENST00000410423 189 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU7-167P-201ENST00000459160 62 ntBASIC-1.13□□□□□ -2.59
TNFP01375 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.13□□□□□ -2.59
TNFP01375 SNORD27.1-201ENST00000516319 72 ntBASIC-1.13□□□□□ -2.59
TNFP01375 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.13□□□□□ -2.59
TNFP01375 AP003072.1-201ENST00000531740 145 ntBASIC-1.13□□□□□ -2.59
TNFP01375 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.13□□□□□ -2.59
TNFP01375 AL442663.2-201ENST00000554385 511 ntBASIC-1.13□□□□□ -2.59
TNFP01375 AC009248.2-201ENST00000619826 254 ntBASIC-1.13□□□□□ -2.59
TNFP01375 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.13□□□□□ -2.59
TNFP01375 MIR365A-201ENST00000362260 87 ntBASIC-1.14□□□□□ -2.59
TNFP01375 SNORD115-25-201ENST00000362619 82 ntBASIC-1.14□□□□□ -2.59
TNFP01375 SNORD14E-201ENST00000364009 85 ntBASIC-1.14□□□□□ -2.59
TNFP01375 SNORD115-32-201ENST00000364079 82 ntBASIC-1.14□□□□□ -2.59
TNFP01375 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.14□□□□□ -2.59
TNFP01375 SNORD74.6-201ENST00000364796 70 ntBASIC-1.14□□□□□ -2.59
TNFP01375 SNORA1.2-201ENST00000365189 134 ntBASIC-1.14□□□□□ -2.59
TNFP01375 RNU6-74P-201ENST00000384235 107 ntBASIC-1.14□□□□□ -2.59
TNFP01375 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.14□□□□□ -2.59
TNFP01375 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.14□□□□□ -2.59
TNFP01375 AC074085.1-201ENST00000413598 418 ntBASIC-1.14□□□□□ -2.59
TNFP01375 RNU7-138P-201ENST00000459479 64 ntBASIC-1.14□□□□□ -2.59
TNFP01375 RNU6-998P-201ENST00000515894 101 ntBASIC-1.14□□□□□ -2.59
TNFP01375 RNU6-531P-201ENST00000516694 104 ntBASIC-1.14□□□□□ -2.59
TNFP01375 MTND1P24-201ENST00000552175 861 ntBASIC-1.14□□□□□ -2.59
TNFP01375 YWHAEP3-201ENST00000582767 121 ntBASIC-1.14□□□□□ -2.59
TNFP01375 AC080013.3-201ENST00000606839 578 ntBASIC-1.14□□□□□ -2.59
TNFP01375 AL445584.3-201ENST00000617173 78 ntBASIC-1.14□□□□□ -2.59
TNFP01375 uc_338.10-201ENST00000621872 182 ntBASIC-1.14□□□□□ -2.59
TNFP01375 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.15□□□□□ -2.59
TNFP01375 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms