Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 HMGN2P32-201ENST00000444648 269 ntBASIC0.89□□□□□ -2.27
PGK1P00558 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.89□□□□□ -2.27
PGK1P00558 U8.19-201ENST00000459095 133 ntBASIC0.89□□□□□ -2.27
PGK1P00558 SNORD11-201ENST00000459124 84 ntBASIC0.89□□□□□ -2.27
PGK1P00558 RNU7-41P-201ENST00000515917 61 ntBASIC0.89□□□□□ -2.27
PGK1P00558 SNORA74.3-201ENST00000517108 154 ntBASIC0.89□□□□□ -2.27
PGK1P00558 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
PGK1P00558 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.89□□□□□ -2.27
PGK1P00558 AL356055.1-201ENST00000602528 446 ntBASIC0.89□□□□□ -2.27
PGK1P00558 RNU6-674P-201ENST00000363831 107 ntBASIC0.88□□□□□ -2.27
PGK1P00558 SNORA33.2-201ENST00000365413 134 ntBASIC0.88□□□□□ -2.27
PGK1P00558 Y_RNA.569-201ENST00000384749 103 ntBASIC0.88□□□□□ -2.27
PGK1P00558 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AL603910.2-201ENST00000407268 136 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AC245047.8-201ENST00000456455 284 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AP003716.2-201ENST00000528260 108 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.88□□□□□ -2.27
PGK1P00558 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.88□□□□□ -2.27
PGK1P00558 AC008507.4-201ENST00000585464 127 ntBASIC0.88□□□□□ -2.27
PGK1P00558 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
PGK1P00558 Y_RNA.16-201ENST00000362421 102 ntBASIC0.87□□□□□ -2.27
PGK1P00558 Y_RNA.19-201ENST00000362462 99 ntBASIC0.87□□□□□ -2.27
PGK1P00558 RNU6-1084P-201ENST00000362498 107 ntBASIC0.87□□□□□ -2.27
PGK1P00558 MIR193B-201ENST00000384907 83 ntBASIC0.87□□□□□ -2.27
PGK1P00558 MIR136-201ENST00000385207 82 ntBASIC0.87□□□□□ -2.27
PGK1P00558 SNORD72-201ENST00000390994 80 ntBASIC0.87□□□□□ -2.27
PGK1P00558 SNORD12-201ENST00000391002 90 ntBASIC0.87□□□□□ -2.27
PGK1P00558 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
PGK1P00558 MTND5P22-201ENST00000458380 195 ntBASIC0.87□□□□□ -2.27
PGK1P00558 Y_RNA.637-201ENST00000459424 114 ntBASIC0.87□□□□□ -2.27
PGK1P00558 JPX_2.1-201ENST00000614161 69 ntBASIC0.87□□□□□ -2.27
PGK1P00558 Y_RNA.30-201ENST00000362572 97 ntBASIC0.86□□□□□ -2.27
PGK1P00558 RNU6-1272P-201ENST00000362776 107 ntBASIC0.86□□□□□ -2.27
PGK1P00558 Y_RNA.64-201ENST00000362845 102 ntBASIC0.86□□□□□ -2.27
PGK1P00558 RNU6-770P-201ENST00000363929 105 ntBASIC0.86□□□□□ -2.27
PGK1P00558 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
PGK1P00558 MTCO2P33-201ENST00000402100 465 ntBASIC0.86□□□□□ -2.27
PGK1P00558 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
PGK1P00558 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
PGK1P00558 AC091959.1-201ENST00000495857 238 ntBASIC0.86□□□□□ -2.27
PGK1P00558 SNORA40.15-201ENST00000516884 107 ntBASIC0.86□□□□□ -2.27
PGK1P00558 SNORA18.7-201ENST00000516910 131 ntBASIC0.86□□□□□ -2.27
PGK1P00558 RPL23AP91-201ENST00000569211 455 ntBASIC0.86□□□□□ -2.27
PGK1P00558 AC087685.1-201ENST00000587507 141 ntBASIC0.86□□□□□ -2.27
PGK1P00558 PRELID3BP2-201ENST00000605362 201 ntBASIC0.86□□□□□ -2.27
PGK1P00558 AL021707.8-201ENST00000609428 183 ntBASIC0.86□□□□□ -2.27
PGK1P00558 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PGK1P00558 Y_RNA.217-201ENST00000364214 105 ntBASIC0.85□□□□□ -2.27
PGK1P00558 MIR15B-201ENST00000385045 98 ntBASIC0.85□□□□□ -2.27
PGK1P00558 SNORD28B-201ENST00000390993 75 ntBASIC0.85□□□□□ -2.27
PGK1P00558 RNU6-1248P-201ENST00000391096 64 ntBASIC0.85□□□□□ -2.27
PGK1P00558 Y_RNA.641-201ENST00000459414 105 ntBASIC0.85□□□□□ -2.27
PGK1P00558 RN7SKP164-201ENST00000516138 266 ntBASIC0.85□□□□□ -2.27
PGK1P00558 AP003733.2-201ENST00000529409 171 ntBASIC0.85□□□□□ -2.27
PGK1P00558 MIR1273G-201ENST00000577677 100 ntBASIC0.85□□□□□ -2.27
PGK1P00558 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.85□□□□□ -2.27
PGK1P00558 AL008718.3-201ENST00000610217 321 ntBASIC0.85□□□□□ -2.27
PGK1P00558 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.85□□□□□ -2.27
PGK1P00558 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.85□□□□□ -2.27
PGK1P00558 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
PGK1P00558 RNU6-899P-201ENST00000363947 107 ntBASIC0.84□□□□□ -2.27
PGK1P00558 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
PGK1P00558 SNORD14E-201ENST00000364009 85 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNU6-268P-201ENST00000364174 107 ntBASIC0.84□□□□□ -2.27
PGK1P00558 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNU6-1227P-201ENST00000383981 107 ntBASIC0.84□□□□□ -2.27
PGK1P00558 MIR1185-1-201ENST00000408598 86 ntBASIC0.84□□□□□ -2.27
PGK1P00558 AC113618.1-201ENST00000416747 285 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.27
PGK1P00558 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PGK1P00558 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNY3P15-201ENST00000516297 97 ntBASIC0.84□□□□□ -2.27
PGK1P00558 RNU2-31P-201ENST00000516954 155 ntBASIC0.84□□□□□ -2.27
PGK1P00558 MIR4764-201ENST00000580680 88 ntBASIC0.84□□□□□ -2.27
PGK1P00558 AC013791.1-201ENST00000616619 62 ntBASIC0.84□□□□□ -2.27
PGK1P00558 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
PGK1P00558 Y_RNA.84-201ENST00000363011 104 ntBASIC0.83□□□□□ -2.28
PGK1P00558 SNORA25.3-201ENST00000363205 127 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU6-442P-201ENST00000383968 104 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU6-662P-201ENST00000384253 104 ntBASIC0.83□□□□□ -2.28
PGK1P00558 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU6-985P-201ENST00000410182 104 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU6-383P-201ENST00000410864 94 ntBASIC0.83□□□□□ -2.28
PGK1P00558 RNU7-43P-201ENST00000516554 64 ntBASIC0.83□□□□□ -2.28
PGK1P00558 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
PGK1P00558 AC007742.2-201ENST00000618226 398 ntBASIC0.83□□□□□ -2.28
PGK1P00558 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
PGK1P00558 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
PGK1P00558 SNORA25.1-201ENST00000362326 128 ntBASIC0.82□□□□□ -2.28
PGK1P00558 RNA5SP264-201ENST00000363115 107 ntBASIC0.82□□□□□ -2.28
PGK1P00558 Y_RNA.202-201ENST00000364083 110 ntBASIC0.82□□□□□ -2.28
PGK1P00558 RNU6-326P-201ENST00000365480 107 ntBASIC0.82□□□□□ -2.28
PGK1P00558 MIR520C-201ENST00000385005 87 ntBASIC0.82□□□□□ -2.28
PGK1P00558 MIR1302-7-201ENST00000408841 72 ntBASIC0.82□□□□□ -2.28
PGK1P00558 BTF3P11-201ENST00000426582 477 ntBASIC0.82□□□□□ -2.28
PGK1P00558 AL731563.1-201ENST00000442202 214 ntBASIC0.82□□□□□ -2.28
PGK1P00558 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms