Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-770P-201ENST00000363929 105 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.210-201ENST00000364161 110 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 RNU6-268P-201ENST00000364174 107 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.569-201ENST00000384749 103 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 SNORD12-201ENST00000391002 90 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 MIR1302-7-201ENST00000408841 72 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.701-201ENST00000516812 110 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.721-201ENST00000517207 102 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.68□□□□□ -2.3
CTDNEP1O95476 MIR548AR-201ENST00000582191 57 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CTDNEP1O95476 AC008163.1-202ENST00000636004 2889 ntBASIC0.68□□□□□ -2.3
CTDNEP1O95476 Y_RNA.19-201ENST00000362462 99 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 RNU6-290P-201ENST00000365212 101 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 Y_RNA.380-201ENST00000365663 111 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 SNORA80D-201ENST00000384488 135 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 RNU6-383P-201ENST00000410864 94 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 HMGN2P32-201ENST00000444648 269 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.67□□□□□ -2.3
CTDNEP1O95476 MTND5P22-201ENST00000458380 195 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 RN7SKP164-201ENST00000516138 266 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 RNY3P15-201ENST00000516297 97 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 AL355297.3-201ENST00000604082 446 ntBASIC0.67□□□□□ -2.3
CTDNEP1O95476 SNORD14E-201ENST00000364009 85 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 MIR570-201ENST00000384917 97 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 MIR518E-201ENST00000385252 88 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 SNORA4-201ENST00000584302 138 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 AL021707.8-201ENST00000609428 183 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 JPX_2.1-201ENST00000614161 69 ntBASIC0.66□□□□□ -2.3
CTDNEP1O95476 RNU6-1272P-201ENST00000362776 107 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 Y_RNA.122-201ENST00000363331 96 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU6-899P-201ENST00000363947 107 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 Y_RNA.276-201ENST00000364732 109 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 SNORA33.2-201ENST00000365413 134 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU6-42P-201ENST00000384165 107 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU6-662P-201ENST00000384253 104 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 AC091959.1-201ENST00000495857 238 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.65□□□□□ -2.31
CTDNEP1O95476 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU6-830P-201ENST00000516353 107 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU7-43P-201ENST00000516554 64 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 SNORA40.15-201ENST00000516884 107 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 RNU2-31P-201ENST00000516954 155 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 AL512605.2-201ENST00000592972 256 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 AL356055.1-201ENST00000602528 446 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 AC013791.1-201ENST00000616619 62 ntBASIC0.65□□□□□ -2.31
CTDNEP1O95476 MIR103A2-201ENST00000362154 78 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 Y_RNA.217-201ENST00000364214 105 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU4-10P-201ENST00000364383 140 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 Y_RNA.269-201ENST00000364685 89 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6-442P-201ENST00000383968 104 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6-1248P-201ENST00000391096 64 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6-985P-201ENST00000410182 104 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AL392103.1-201ENST00000447000 198 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 Y_RNA.641-201ENST00000459414 105 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU4-57P-201ENST00000515980 135 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 Y_RNA.714-201ENST00000517065 90 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU6-1223P-201ENST00000517124 104 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 RNU7-181P-201ENST00000517234 74 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AP003733.2-201ENST00000529409 171 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.64□□□□□ -2.31
CTDNEP1O95476 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.64□□□□□ -2.31
CTDNEP1O95476 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AC087685.1-201ENST00000587507 141 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AL008718.3-201ENST00000610217 321 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 AC022140.2-201ENST00000623500 188 ntBASIC0.64□□□□□ -2.31
CTDNEP1O95476 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
CTDNEP1O95476 Y_RNA.84-201ENST00000363011 104 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 RNU6-1205P-201ENST00000363625 106 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 RNU6-326P-201ENST00000365480 107 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 MIR15B-201ENST00000385045 98 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 AC113618.1-201ENST00000416747 285 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.63□□□□□ -2.31
CTDNEP1O95476 RNU7-90P-201ENST00000459216 62 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.63□□□□□ -2.31
CTDNEP1O95476 MIR5692C2-201ENST00000577959 77 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 MIR2681-201ENST00000581814 105 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 AC006441.5-201ENST00000612680 209 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 snoU18.1-201ENST00000629629 71 ntBASIC0.63□□□□□ -2.31
CTDNEP1O95476 Y_RNA.202-201ENST00000364083 110 ntBASIC0.62□□□□□ -2.31
CTDNEP1O95476 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
CTDNEP1O95476 SNORD38C-201ENST00000384381 69 ntBASIC0.62□□□□□ -2.31
CTDNEP1O95476 Y_RNA.512-201ENST00000384518 102 ntBASIC0.62□□□□□ -2.31
CTDNEP1O95476 Y_RNA.572-201ENST00000384757 98 ntBASIC0.62□□□□□ -2.31
CTDNEP1O95476 U8.17-201ENST00000391292 132 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms