Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
NDUFS3O75489 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NDUFS3O75489 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
NDUFS3O75489 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.140-201ENST00000363474 103 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.229-201ENST00000364347 113 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.277-201ENST00000364754 102 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.352-201ENST00000365439 102 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 SNORD28B-201ENST00000390993 75 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 RNU6-482P-201ENST00000391068 107 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 MIR1302-3-201ENST00000408128 138 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 SNORD127-201ENST00000458892 86 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.23□□□□□ -2.21
NDUFS3O75489 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.23□□□□□ -2.21
NDUFS3O75489 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Pinc.1-201ENST00000616452 154 ntBASIC1.23□□□□□ -2.21
NDUFS3O75489 Y_RNA.122-201ENST00000363331 96 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 Y_RNA.242-201ENST00000364473 110 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 Y_RNA.363-201ENST00000365529 113 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 MIR626-201ENST00000385032 94 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 RNU7-43P-201ENST00000516554 64 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 MIR548AR-201ENST00000582191 57 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.22□□□□□ -2.21
NDUFS3O75489 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 SNORD77.4-201ENST00000516158 81 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 RNU7-25P-201ENST00000516544 62 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 RNU7-181P-201ENST00000517234 74 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 MIR4282-201ENST00000583613 67 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 AL391903.3-201ENST00000612158 163 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
NDUFS3O75489 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
NDUFS3O75489 SNORA25.3-201ENST00000363205 127 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 RNU6-1138P-201ENST00000365359 106 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 MIR570-201ENST00000384917 97 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 MT-TT-201ENST00000387460 66 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 U8.17-201ENST00000391292 132 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 AP1B1P2-201ENST00000416196 106 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.2□□□□□ -2.22
NDUFS3O75489 MTND3P2-201ENST00000438452 342 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.2□□□□□ -2.22
NDUFS3O75489 RNU6-1132P-201ENST00000459214 107 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 Y_RNA.638-201ENST00000459374 113 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 SNORD116-28-201ENST00000516123 91 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 Y_RNA.666-201ENST00000516187 112 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 MIR5688-201ENST00000580619 83 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 AL365265.1-201ENST00000621045 234 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
NDUFS3O75489 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NDUFS3O75489 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
NDUFS3O75489 Y_RNA.416-201ENST00000384014 113 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 Y_RNA.477-201ENST00000384352 108 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 Y_RNA.486-201ENST00000384398 107 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
NDUFS3O75489 MIR548O-201ENST00000408583 114 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 MIR548H3-201ENST00000408771 118 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.19□□□□□ -2.22
NDUFS3O75489 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.19□□□□□ -2.22
NDUFS3O75489 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 RNU6-830P-201ENST00000516353 107 ntBASIC1.19□□□□□ -2.22
NDUFS3O75489 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.19□□□□□ -2.22
NDUFS3O75489 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.19□□□□□ -2.22
NDUFS3O75489 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
NDUFS3O75489 Y_RNA.76-201ENST00000362931 109 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 SNORD27-201ENST00000363981 72 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 snoU2_19.4-201ENST00000364329 80 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 Y_RNA.304-201ENST00000365011 112 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 Y_RNA.556-201ENST00000384677 113 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.18□□□□□ -2.22
NDUFS3O75489 RNU4-57P-201ENST00000515980 135 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 Y_RNA.668-201ENST00000516233 93 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 AP000942.3-201ENST00000603702 160 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
NDUFS3O75489 Y_RNA.547-201ENST00000384654 119 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 Y_RNA.562-201ENST00000384695 113 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 RNU6-453P-201ENST00000516819 85 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 MIR4662B-201ENST00000579498 81 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 PRELID3BP2-201ENST00000605362 201 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 AL442067.1-201ENST00000613261 223 ntBASIC1.17□□□□□ -2.22
NDUFS3O75489 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
NDUFS3O75489 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
NDUFS3O75489 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms