Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-1125P-201ENST00000363601 107 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 MIR518F-201ENST00000384973 87 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 MIR504-201ENST00000385065 83 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 AL359511.1-201ENST00000402970 211 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 SNORA11.4-201ENST00000408823 129 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 FTH1P12-201ENST00000432137 551 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 AC022137.1-201ENST00000483735 151 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 AC084364.2-201ENST00000546924 395 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 MIR3126-201ENST00000577443 74 ntBASIC3.21□□□□□ -1.9
PTCD1O75127 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.21□□□□□ -1.9
PTCD1O75127 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PTCD1O75127 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCD1O75127 SNORD24-201ENST00000383884 75 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 RNU6-787P-201ENST00000384032 107 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTCD1O75127 RNA5SP425-201ENST00000410336 112 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 RN7SKP223-201ENST00000410582 62 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 AC245047.3-201ENST00000429428 127 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 SNRPGP13-201ENST00000442212 177 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 RPS26P48-201ENST00000491713 339 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 AC234781.5-201ENST00000508429 271 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCD1O75127 AC046143.2-201ENST00000609789 160 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.2□□□□□ -1.9
PTCD1O75127 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCD1O75127 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCD1O75127 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
PTCD1O75127 AP006437.1-201ENST00000641440 3685 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 RNU6-349P-201ENST00000362402 107 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 Y_RNA.93-201ENST00000363066 109 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 Y_RNA.265-201ENST00000364677 108 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 AL606517.2-201ENST00000442855 241 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 RN7SL297P-201ENST00000483161 293 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 RNU6-521P-201ENST00000516663 105 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 SUMO2P16-201ENST00000519475 264 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 MIR5197-201ENST00000583721 112 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.19□□□□□ -1.9
PTCD1O75127 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PTCD1O75127 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTCD1O75127 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCD1O75127 SNORD14E-201ENST00000364009 85 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 Y_RNA.213-201ENST00000364178 111 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 SNORA63D-201ENST00000364359 132 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 Y_RNA.244-201ENST00000364484 109 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 RNA5SP109-201ENST00000391010 116 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 RN7SKP192-201ENST00000411291 327 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
PTCD1O75127 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.18□□□□□ -1.9
PTCD1O75127 MIR4648-201ENST00000580107 72 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 MIR2052-201ENST00000636055 55 ntBASIC3.18□□□□□ -1.9
PTCD1O75127 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTCD1O75127 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCD1O75127 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCD1O75127 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCD1O75127 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTCD1O75127 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTCD1O75127 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 RNU6-497P-201ENST00000365316 104 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 MIR548D2-201ENST00000384955 97 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 BX510359.4-201ENST00000423750 193 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 RNU7-123P-201ENST00000515911 60 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 RNU6-237P-201ENST00000515985 71 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTCD1O75127 MIR4524B-201ENST00000581569 115 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.17□□□□□ -1.9
PTCD1O75127 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCD1O75127 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTCD1O75127 RNU1-58P-201ENST00000362413 163 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 Y_RNA.298-201ENST00000364960 107 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 RNU6-690P-201ENST00000365242 106 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 RNU6-442P-201ENST00000383968 104 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 MIR29C-201ENST00000385231 88 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 RNU6-56P-201ENST00000516986 93 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.16□□□□□ -1.9
PTCD1O75127 AC022254.1-201ENST00000567857 235 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 MIR4769-201ENST00000584126 77 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 MIR548Z-201ENST00000584743 97 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 AC022513.1-201ENST00000624512 117 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.16□□□□□ -1.9
PTCD1O75127 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCD1O75127 RNY3P2-201ENST00000362918 102 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 snoU2-30.1-201ENST00000365012 70 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 MIR548O-201ENST00000408583 114 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCD1O75127 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCD1O75127 RNU7-61P-201ENST00000515897 61 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 RNU2-13P-201ENST00000515909 113 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 RNU6-162P-201ENST00000516228 103 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 AC005786.1-201ENST00000588553 154 ntBASIC3.15□□□□□ -1.91
PTCD1O75127 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCD1O75127 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCD1O75127 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 RNU1-148P-201ENST00000384472 162 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 RPL39P39-201ENST00000455840 151 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 SNORD45.4-201ENST00000516629 73 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 AC002984.1-201ENST00000591692 448 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms