Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL670379.3-201ENST00000605040 251 ntBASIC2.64□□□□□ -1.99
SMARCA5O60264 AL590808.1-201ENST00000618696 141 ntBASIC2.64□□□□□ -1.99
SMARCA5O60264 U6.108-201ENST00000637764 58 ntBASIC2.64□□□□□ -1.99
SMARCA5O60264 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCA5O60264 RNU6-661P-201ENST00000362409 107 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 SNORA12.1-201ENST00000390873 148 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 RNU6-360P-201ENST00000390944 104 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 Y_RNA.621-201ENST00000411065 96 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.63□□□□□ -1.99
SMARCA5O60264 AC023449.1-201ENST00000454464 154 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 RNA5SP200-201ENST00000516360 103 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 SNORA18.4-201ENST00000516440 124 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 SNORA31.17-201ENST00000516953 127 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 MIR3129-201ENST00000581095 76 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 AL022345.2-201ENST00000606307 135 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.63□□□□□ -1.99
SMARCA5O60264 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCA5O60264 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMARCA5O60264 MIRLET7G-201ENST00000362280 84 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 Y_RNA.253-201ENST00000364562 112 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 MIR548A1-201ENST00000385041 97 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RN7SKP223-201ENST00000410582 62 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RNA5SP127-201ENST00000411051 133 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RPS29P21-201ENST00000496272 170 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 AL163195.1-201ENST00000496941 348 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RN7SKP19-201ENST00000516016 252 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RNA5SP236-201ENST00000516169 116 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 RNU6-365P-201ENST00000517113 106 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 JPX_2.1-201ENST00000614161 69 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
SMARCA5O60264 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.62□□□□□ -1.99
SMARCA5O60264 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMARCA5O60264 RNA5SP160-201ENST00000364866 120 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 SNORD18B-201ENST00000365659 72 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 SNORD61-201ENST00000384252 73 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 SNORD116-21-201ENST00000384507 92 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 MIR548A2-201ENST00000384956 97 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 MIR548A3-201ENST00000385297 97 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 RNA5SP508-201ENST00000411327 119 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 AC233266.1-201ENST00000454518 96 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 AC242852.1-201ENST00000612151 96 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 AC244015.1-201ENST00000622301 99 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 AP000553.5-201ENST00000641933 54 ntBASIC2.61□□□□□ -1.99
SMARCA5O60264 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SMARCA5O60264 Y_RNA.43-201ENST00000362670 111 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 RNU6-647P-201ENST00000364243 107 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 RNA5SP126-201ENST00000365092 109 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 MIR520G-201ENST00000385064 90 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 SNORA26-201ENST00000391286 122 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 SNRPGP10-201ENST00000432323 225 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 HMGN1P7-201ENST00000491722 313 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 RNU6-1270P-201ENST00000517128 108 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 RNA5SP170-201ENST00000517150 101 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 MIR4679-2-201ENST00000578358 77 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 MIR4662B-201ENST00000579498 81 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 SNRPGP19-201ENST00000603826 189 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 MIR376A2-201ENST00000636782 80 ntBASIC2.6□□□□□ -1.99
SMARCA5O60264 RNA5SP89-201ENST00000410300 108 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 RNA5SP338-201ENST00000410495 85 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 HMGN2P19-201ENST00000425149 265 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 Y_RNA.666-201ENST00000516187 112 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 AC025166.1-201ENST00000612411 163 ntBASIC2.59□□□□□ -1.99
SMARCA5O60264 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.59□□□□□ -2
SMARCA5O60264 ZNF658B-202ENST00000615961 3375 ntBASIC2.59□□□□□ -2
SMARCA5O60264 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMARCA5O60264 Y_RNA.267-201ENST00000364679 109 ntBASIC2.58□□□□□ -2
SMARCA5O60264 HSPE1P9-201ENST00000440046 311 ntBASIC2.58□□□□□ -2
SMARCA5O60264 RPL23AP42-201ENST00000471152 471 ntBASIC2.58□□□□□ -2
SMARCA5O60264 RPL23AP63-201ENST00000498752 471 ntBASIC2.58□□□□□ -2
SMARCA5O60264 AC008507.4-201ENST00000585464 127 ntBASIC2.58□□□□□ -2
SMARCA5O60264 Y_RNA.783-201ENST00000613546 102 ntBASIC2.58□□□□□ -2
SMARCA5O60264 AL121890.5-201ENST00000620848 304 ntBASIC2.58□□□□□ -2
SMARCA5O60264 MIR6132-201ENST00000622083 109 ntBASIC2.58□□□□□ -2
SMARCA5O60264 MIR6079-201ENST00000635807 62 ntBASIC2.58□□□□□ -2
SMARCA5O60264 MIR4679-1-201ENST00000637619 75 ntBASIC2.58□□□□□ -2
SMARCA5O60264 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMARCA5O60264 AC018630.2-201ENST00000534866 2403 ntBASIC2.58□□□□□ -2
SMARCA5O60264 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMARCA5O60264 MTND5P18-201ENST00000445624 1801 ntBASIC2.57□□□□□ -2
SMARCA5O60264 RNU6-1255P-201ENST00000363434 112 ntBASIC2.57□□□□□ -2
SMARCA5O60264 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.57□□□□□ -2
SMARCA5O60264 AF228730.3-201ENST00000436691 102 ntBASIC2.57□□□□□ -2
SMARCA5O60264 AL021397.1-201ENST00000451806 248 ntBASIC2.57□□□□□ -2
SMARCA5O60264 Y_RNA.649-201ENST00000459077 103 ntBASIC2.57□□□□□ -2
SMARCA5O60264 RNU6-504P-201ENST00000516568 104 ntBASIC2.57□□□□□ -2
SMARCA5O60264 RNA5SP437-201ENST00000517249 129 ntBASIC2.57□□□□□ -2
SMARCA5O60264 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA5O60264 AL591926.4-201ENST00000616895 298 ntBASIC2.57□□□□□ -2
SMARCA5O60264 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.57□□□□□ -2
SMARCA5O60264 RNU6-888P-201ENST00000363010 101 ntBASIC2.56□□□□□ -2
SMARCA5O60264 RNU6-414P-201ENST00000363705 104 ntBASIC2.56□□□□□ -2
SMARCA5O60264 SNORD77.3-201ENST00000391113 65 ntBASIC2.56□□□□□ -2
SMARCA5O60264 MIR1263-201ENST00000408324 86 ntBASIC2.56□□□□□ -2
SMARCA5O60264 CALM2P4-201ENST00000430810 426 ntBASIC2.56□□□□□ -2
SMARCA5O60264 SCARNA15-202ENST00000516881 127 ntBASIC2.56□□□□□ -2
SMARCA5O60264 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.56□□□□□ -2
SMARCA5O60264 IGKV3-31-201ENST00000523109 329 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms