Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC005828.6-201ENST00000606610 232 ntBASIC-1.38□□□□□ -2.63
SSSCA1O60232 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.39□□□□□ -2.63
SSSCA1O60232 RNU6-597P-201ENST00000365620 102 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 RPL30P16-201ENST00000419341 429 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 AC016907.1-201ENST00000419483 435 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 MTND2P18-201ENST00000419962 1030 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 RNU6-410P-201ENST00000517006 107 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 DEFB131E-201ENST00000532329 154 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 SCOCP1-201ENST00000554676 349 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 MIR4520-1-201ENST00000582609 70 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 MIR548AE1-201ENST00000583292 70 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 AC005972.2-201ENST00000604690 348 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 AL360085.1-201ENST00000604713 532 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 AC009248.2-201ENST00000619826 254 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.39□□□□□ -2.63
SSSCA1O60232 AL163152.1-201ENST00000642001 374 ntBASIC-1.39□□□□□ -2.63
SSSCA1O60232 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.4□□□□□ -2.63
SSSCA1O60232 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
SSSCA1O60232 MIR4703-201ENST00000577728 79 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 AC145423.2-201ENST00000610631 239 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 AL662814.1-201ENST00000617364 121 ntBASIC-1.4□□□□□ -2.63
SSSCA1O60232 RNU6-454P-201ENST00000364292 107 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 SNORD115-35-201ENST00000365122 82 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 RNU6-442P-201ENST00000383968 104 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 RNU6-905P-201ENST00000384434 107 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 RNU6-541P-201ENST00000384709 110 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 MIR521-1-201ENST00000384902 87 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 RNU6-159P-201ENST00000391080 106 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.41□□□□□ -2.64
SSSCA1O60232 RPL39P25-201ENST00000449384 154 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 AC021146.9-201ENST00000512503 156 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 SERF1AP1-201ENST00000514575 187 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 AC011373.1-201ENST00000607270 237 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 MIR198-201ENST00000637333 62 ntBASIC-1.41□□□□□ -2.64
SSSCA1O60232 SNORD115-32-201ENST00000364079 82 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 RNU6-606P-201ENST00000384721 111 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 RNU2-29P-201ENST00000410423 189 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 MTND3P8-201ENST00000412909 339 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 RPL30P15-201ENST00000457129 321 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 RPL30P10-201ENST00000488148 337 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 MTCO1P29-201ENST00000496868 288 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 RNA5SP272-201ENST00000516095 111 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 POLR3GP2-201ENST00000588366 668 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 U2.17-201ENST00000611454 95 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 AL512506.1-201ENST00000613918 449 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 MIR6502-201ENST00000617296 76 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 uc_338.10-201ENST00000621872 182 ntBASIC-1.42□□□□□ -2.64
SSSCA1O60232 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 RNU6-509P-201ENST00000363519 107 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 AL603914.1-201ENST00000401964 204 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.43□□□□□ -2.64
SSSCA1O60232 SNORD27.1-201ENST00000516319 72 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 AC109347.2-201ENST00000610220 349 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 uc_338.11-201ENST00000619132 160 ntBASIC-1.43□□□□□ -2.64
SSSCA1O60232 SNORD114-29-201ENST00000364819 70 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 RNU6-74P-201ENST00000384235 107 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 AC104850.1-201ENST00000435940 476 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 U4.1-201ENST00000620349 87 ntBASIC-1.44□□□□□ -2.64
SSSCA1O60232 RNU6-660P-201ENST00000364566 109 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 SNORD74.6-201ENST00000364796 70 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 SNORD24-201ENST00000383884 75 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 RNU6-767P-201ENST00000384132 107 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 MIR527-201ENST00000385244 85 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 MIR1468-201ENST00000410600 86 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.45□□□□□ -2.64
SSSCA1O60232 RNU6-531P-201ENST00000516694 104 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 AC022616.4-201ENST00000522985 181 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 AL133173.2-201ENST00000614270 90 ntBASIC-1.45□□□□□ -2.64
SSSCA1O60232 SNORD50.1-201ENST00000362987 71 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 RNU1-141P-201ENST00000364623 158 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 RNA5SP331-201ENST00000364986 107 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 SNORD72-201ENST00000390994 80 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 AL603910.2-201ENST00000407268 136 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 RNU6-983P-201ENST00000516004 103 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 PIGPP4-201ENST00000584447 307 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 AC245014.2-201ENST00000603689 287 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 AC008536.2-201ENST00000607284 349 ntBASIC-1.46□□□□□ -2.64
SSSCA1O60232 AL445584.3-201ENST00000617173 78 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms