Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PRPF3O43395 snoU2_19.4-201ENST00000364329 80 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 SNORD50B-201ENST00000364995 70 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 RNU6-493P-201ENST00000391321 108 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.85□□□□□ -2.11
PRPF3O43395 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 AC008507.4-201ENST00000585464 127 ntBASIC1.85□□□□□ -2.11
PRPF3O43395 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PRPF3O43395 Y_RNA.257-201ENST00000364596 102 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 RNU6-923P-201ENST00000364753 107 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 RNU6-1138P-201ENST00000365359 106 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 SNORD38C-201ENST00000384381 69 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 MIR616-201ENST00000385293 97 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 Y_RNA.587-201ENST00000391210 103 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 MIR1287-201ENST00000408492 90 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 RNU2-55P-201ENST00000411146 174 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
PRPF3O43395 AC245047.8-201ENST00000456455 284 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 RN7SKP164-201ENST00000516138 266 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
PRPF3O43395 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.84□□□□□ -2.11
PRPF3O43395 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
PRPF3O43395 MIR411-201ENST00000362239 96 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 MIR136-201ENST00000385207 82 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 RNU6-847P-201ENST00000411115 108 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPF3O43395 MIR4781-201ENST00000585250 76 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 AL391903.3-201ENST00000612158 163 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 AC106754.2-201ENST00000623006 233 ntBASIC1.83□□□□□ -2.12
PRPF3O43395 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 MT-TT-201ENST00000387460 66 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 AC108667.1-201ENST00000428618 249 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 SCARNA8-201ENST00000515924 131 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 RNU7-149P-201ENST00000516739 59 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 RNU6-453P-201ENST00000516819 85 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PRPF3O43395 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PRPF3O43395 AL442644.1-201ENST00000454390 3105 ntBASIC1.82□□□□□ -2.12
PRPF3O43395 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 Y_RNA.274-201ENST00000364714 101 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 SNORD72-201ENST00000390994 80 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.81□□□□□ -2.12
PRPF3O43395 SNORD77.4-201ENST00000516158 81 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 MIR3671-201ENST00000580455 88 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 MIR4308-201ENST00000580634 81 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 Z83818.1-201ENST00000603584 150 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 AC090425.1-201ENST00000610007 140 ntBASIC1.81□□□□□ -2.12
PRPF3O43395 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PRPF3O43395 Y_RNA.7-201ENST00000362352 102 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 RNU6-103P-201ENST00000363686 107 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 RNU6-200P-201ENST00000364743 107 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 Y_RNA.297-201ENST00000364950 91 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 AL606845.1-201ENST00000404881 255 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.8□□□□□ -2.12
PRPF3O43395 RNU6-830P-201ENST00000516353 107 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 AL365434.2-201ENST00000607979 234 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 AC006441.5-201ENST00000612680 209 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 Pinc.1-201ENST00000616452 154 ntBASIC1.8□□□□□ -2.12
PRPF3O43395 RNU6-1228P-201ENST00000391014 107 ntBASIC1.79□□□□□ -2.12
PRPF3O43395 AC015922.2-201ENST00000435593 184 ntBASIC1.79□□□□□ -2.12
PRPF3O43395 AC092991.1-201ENST00000477176 376 ntBASIC1.79□□□□□ -2.12
PRPF3O43395 RNU2-4P-201ENST00000606190 192 ntBASIC1.79□□□□□ -2.12
PRPF3O43395 RNU6-1020P-201ENST00000363684 107 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 RNU6-1318P-201ENST00000365389 103 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 Y_RNA.571-201ENST00000384753 98 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 RNU6-138P-201ENST00000515952 107 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.78□□□□□ -2.12
PRPF3O43395 MIR4744-201ENST00000581563 82 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
PRPF3O43395 Y_RNA.121-201ENST00000363309 113 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 RNU4-70P-201ENST00000384579 139 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 RPL39P39-201ENST00000455840 151 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 AC019176.1-201ENST00000518519 225 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
PRPF3O43395 RNU6-268P-201ENST00000364174 107 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-47P-201ENST00000383866 107 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-1067P-201ENST00000384752 107 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-918P-201ENST00000391219 106 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 Y_RNA.622-201ENST00000411091 108 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 SNRPGP14-201ENST00000435400 219 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 AL138752.1-201ENST00000452964 351 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 Y_RNA.644-201ENST00000459006 113 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-917P-201ENST00000516294 104 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-1299P-201ENST00000516316 100 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 Y_RNA.674-201ENST00000516362 113 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
PRPF3O43395 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
PRPF3O43395 Y_RNA.486-201ENST00000384398 107 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms