Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.53□□□□□ -2.32
DDX39AO00148 RNU7-141P-201ENST00000459304 62 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 RNU6-437P-201ENST00000459408 95 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 SCARNA8-201ENST00000515924 131 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 RNU6-976P-201ENST00000516086 111 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 RNU6-875P-201ENST00000516488 106 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 RN7SL793P-201ENST00000583259 296 ntBASIC0.53□□□□□ -2.32
DDX39AO00148 RNU6-674P-201ENST00000363831 107 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 RNU6-1048P-201ENST00000364054 107 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 Y_RNA.383-201ENST00000383855 97 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 Y_RNA.393-201ENST00000383936 102 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 Y_RNA.540-201ENST00000384638 111 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 RNU6-1237P-201ENST00000384777 107 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 MIR1278-201ENST00000408753 81 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 SNORA36B-201ENST00000410438 131 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 RNU2-14P-201ENST00000411053 191 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.52□□□□□ -2.33
DDX39AO00148 U8.20-201ENST00000459445 131 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 RNU6-496P-201ENST00000516145 99 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 Y_RNA.713-201ENST00000517013 96 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 RPL23AP91-201ENST00000569211 455 ntBASIC0.52□□□□□ -2.33
DDX39AO00148 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.51□□□□□ -2.33
DDX39AO00148 MIR377-201ENST00000362145 69 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 RNU4-80P-201ENST00000363200 141 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 Y_RNA.263-201ENST00000364659 114 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 Y_RNA.356-201ENST00000365475 113 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 Y_RNA.526-201ENST00000384572 110 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 RNY1P4-201ENST00000384595 115 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 SNORD72-201ENST00000390994 80 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 AC236972.2-201ENST00000434979 310 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 RNU7-181P-201ENST00000517234 74 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 MIR548AO-201ENST00000579992 96 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 MIR4791-201ENST00000607666 84 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.51□□□□□ -2.33
DDX39AO00148 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.51□□□□□ -2.33
DDX39AO00148 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
DDX39AO00148 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.5□□□□□ -2.33
DDX39AO00148 RNU6-801P-201ENST00000364087 105 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 RNU4-50P-201ENST00000364361 141 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 Y_RNA.286-201ENST00000364813 102 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 Y_RNA.315-201ENST00000365117 102 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 RNY3-201ENST00000365484 102 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 SNORA72.4-201ENST00000384174 132 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 Y_RNA.471-201ENST00000384312 102 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 MT-TN-201ENST00000387400 73 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 RNU6-1009P-201ENST00000390996 107 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 RNU6-130P-201ENST00000411112 103 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 POLR2KP2-201ENST00000438155 177 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 AC005357.1-201ENST00000588399 301 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 AP000753.3-201ENST00000604083 169 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 PART1_1.1-201ENST00000611761 217 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
DDX39AO00148 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 Y_RNA.58-201ENST00000362807 102 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 Y_RNA.154-201ENST00000363624 102 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 Y_RNA.813-201ENST00000364639 102 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 RNY3P1-201ENST00000365085 102 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 SNORA26.5-201ENST00000391215 123 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 AL603910.2-201ENST00000407268 136 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 RNU6-847P-201ENST00000411115 108 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 SNORD11-201ENST00000459124 84 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 SEPT14P8-201ENST00000508026 178 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 AC040926.1-201ENST00000530195 238 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 SNORD113-5-201ENST00000607261 78 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 AC006441.5-201ENST00000612680 209 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 MTND1P7-201ENST00000632801 297 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 AC112487.2-201ENST00000637950 304 ntBASIC0.49□□□□□ -2.33
DDX39AO00148 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 MIR573-201ENST00000384964 99 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 RNU6-177P-201ENST00000411257 104 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 RNU6-507P-201ENST00000516045 100 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 AC006157.1-201ENST00000611750 366 ntBASIC0.48□□□□□ -2.33
DDX39AO00148 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 MIR7-2-201ENST00000384970 110 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 Y_RNA.579-201ENST00000390939 94 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 RNU6-1248P-201ENST00000391096 64 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 RNU6-475P-201ENST00000516073 104 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 RNU6-191P-201ENST00000516295 94 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.47□□□□□ -2.33
DDX39AO00148 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
DDX39AO00148 Y_RNA.197-201ENST00000364004 102 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 Y_RNA.222-201ENST00000364264 102 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 Y_RNA.418-201ENST00000384029 102 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 MIR520F-201ENST00000384824 87 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 MTND5P20-201ENST00000448677 143 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 RNU2-13P-201ENST00000515909 113 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 RNU6-977P-201ENST00000516411 103 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.46□□□□□ -2.34
DDX39AO00148 MIR4264-201ENST00000583520 66 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
DDX39AO00148 AC007485.1-201ENST00000616755 206 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms