Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 AL603910.2-201ENST00000407268 136 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 SNRPGP14-201ENST00000435400 219 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 AL731563.1-201ENST00000442202 214 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 AC023449.1-201ENST00000454464 154 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 RNU7-21P-201ENST00000459430 62 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 RNU6-570P-201ENST00000517051 105 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 AC068700.1-201ENST00000565862 3754 ntBASIC0.97□□□□□ -2.25
NPIPA3F8WFD2 MIR103A2-201ENST00000362154 78 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.14-201ENST00000362415 103 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 SNORA27.4-201ENST00000516650 95 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 AC015726.2-201ENST00000620112 122 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 snoU18.1-201ENST00000629629 71 ntBASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
NPIPA3F8WFD2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 MIR367-201ENST00000362299 68 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 AC113618.1-201ENST00000416747 285 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 RPS29P28-201ENST00000446439 141 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 RNU7-90P-201ENST00000459216 62 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 MIR4724-201ENST00000579485 89 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 AL049861.1-201ENST00000603130 150 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.95□□□□□ -2.26
NPIPA3F8WFD2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 MIR570-201ENST00000384917 97 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 U8.17-201ENST00000391292 132 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 SERF1AP1-201ENST00000514575 187 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 RN7SKP164-201ENST00000516138 266 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 RNU6-1338P-201ENST00000516328 91 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 RNU6-830P-201ENST00000516353 107 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 RNU7-181P-201ENST00000517234 74 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 AC008133.2-201ENST00000624540 351 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
NPIPA3F8WFD2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.217-201ENST00000364214 105 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 RNU4-10P-201ENST00000364383 140 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 MIR489-201ENST00000384923 84 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 MIR1185-1-201ENST00000408598 86 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 RNU6-1203P-201ENST00000410703 110 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.641-201ENST00000459414 105 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 RNU7-149P-201ENST00000516739 59 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AP003716.2-201ENST00000528260 108 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AP003072.1-201ENST00000531740 145 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AL008718.3-201ENST00000610217 321 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AC006441.5-201ENST00000612680 209 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 uc_338.4-201ENST00000616635 176 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AC022140.2-201ENST00000623500 188 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 MIR4251-201ENST00000635819 61 ntBASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
NPIPA3F8WFD2 AL442644.1-201ENST00000454390 3105 ntBASIC0.92□□□□□ -2.26
NPIPA3F8WFD2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
NPIPA3F8WFD2 AC023827.1-201ENST00000569247 97 ntBASIC0.92□□□□□ -2.26
NPIPA3F8WFD2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.92□□□□□ -2.26
NPIPA3F8WFD2 RMST_2.1-201ENST00000617263 136 ntBASIC0.92□□□□□ -2.26
NPIPA3F8WFD2 RNU6-238P-201ENST00000363313 106 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.422-201ENST00000384054 114 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.512-201ENST00000384518 102 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 RNU6-1109P-201ENST00000391187 107 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 RNA5SP496-201ENST00000391240 109 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 MTATP8P1-201ENST00000467115 207 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 AC006006.1-201ENST00000603082 144 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 SEPT14P17-201ENST00000617978 177 ntBASIC0.91□□□□□ -2.26
NPIPA3F8WFD2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 RNU6-211P-201ENST00000384047 107 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 RNU6-713P-201ENST00000384761 107 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 TRBVB-201ENST00000477100 408 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 RNU6-635P-201ENST00000516651 102 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 AL021707.8-201ENST00000609428 183 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.802-201ENST00000614892 130 ntBASIC0.9□□□□□ -2.27
NPIPA3F8WFD2 UBE2WP1-201ENST00000362030 340 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms