Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR377-201ENST00000362145 69 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-899P-201ENST00000363947 107 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.463-201ENST00000384271 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNY3P14-201ENST00000384309 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.551-201ENST00000384661 102 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.570-201ENST00000384750 101 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR215-201ENST00000384858 110 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 SNORD105-201ENST00000386910 85 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MT-TD-201ENST00000387419 68 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC236972.2-201ENST00000434979 310 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 HMGN2P32-201ENST00000444648 269 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 PDCD5P2-201ENST00000507570 312 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 SNORA31.10-201ENST00000516482 106 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 SNORA40.14-201ENST00000516543 86 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR5190-201ENST00000581537 80 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR2681-201ENST00000581814 105 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC025627.3-201ENST00000582078 182 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MIR4791-201ENST00000607666 84 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC006441.5-201ENST00000612680 209 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 AC013791.1-201ENST00000616619 62 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 MTND4LP32-201ENST00000636111 270 ntBASIC0.25□□□□□ -2.37
COL6A6A6NMZ7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1301P-201ENST00000362724 104 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.424-201ENST00000384063 103 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.527-201ENST00000384573 102 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.599-201ENST00000410489 109 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU2-55P-201ENST00000411146 174 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AL354751.2-201ENST00000415471 210 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC098614.3-201ENST00000438957 440 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RPL30P15-201ENST00000457129 321 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.631-201ENST00000459607 101 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 SNORA25.10-201ENST00000515926 124 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU6-453P-201ENST00000516819 85 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU2-56P-201ENST00000516826 190 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RN7SKP295-201ENST00000517264 153 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC125232.2-201ENST00000592457 143 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AP000753.3-201ENST00000604083 169 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 BX284668.6-201ENST00000606899 438 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 U6atac.1-201ENST00000616025 117 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 SNORA36.2-201ENST00000384004 127 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RNU6-205P-201ENST00000390858 107 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RPS26P5-201ENST00000418544 335 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 MTCO3P10-201ENST00000455912 772 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.715-201ENST00000517082 110 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 RPL23AP91-201ENST00000569211 455 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 MIR5692C2-201ENST00000577959 77 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AC005176.2-201ENST00000596933 147 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 LARP7P1-201ENST00000605576 316 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 AL008636.1-201ENST00000625038 1018 ntBASIC0.24□□□□□ -2.37
COL6A6A6NMZ7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.252-201ENST00000364556 101 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1175P-201ENST00000365200 107 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.341-201ENST00000365341 102 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1126P-201ENST00000384002 107 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 SNORA72.4-201ENST00000384174 132 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 RNU6-306P-201ENST00000384617 107 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 SNORA8.3-201ENST00000384679 139 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 MIR140-201ENST00000385282 100 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 SNORD45.4-201ENST00000516629 73 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC127455.1-201ENST00000565496 145 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AP001180.6-201ENST00000584918 159 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC243994.1-201ENST00000618627 109 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC127459.3-201ENST00000624328 466 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC138305.3-201ENST00000624988 240 ntBASIC0.23□□□□□ -2.37
COL6A6A6NMZ7 AC134026.1-201ENST00000623249 2239 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.494-201ENST00000384432 111 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.498-201ENST00000384460 102 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 SNORD41-201ENST00000386967 70 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNA5SP496-201ENST00000391240 109 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU2-14P-201ENST00000411053 191 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6-847P-201ENST00000411115 108 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 PMCHL1-202ENST00000423102 261 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC244023.1-201ENST00000426884 112 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC092423.1-201ENST00000430165 186 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MTND4LP30-201ENST00000454092 297 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 FGF7P4-201ENST00000509595 295 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6-875P-201ENST00000516488 106 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU7-116P-201ENST00000516940 62 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MIR4724-201ENST00000579485 89 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC242498.1-201ENST00000604134 111 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms