Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR548AR-201ENST00000582191 57 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 AC087685.1-201ENST00000587507 141 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 SEPT14P17-201ENST00000617978 177 ntBASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-654P-201ENST00000364373 107 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-442P-201ENST00000383968 104 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.527-201ENST00000384573 102 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.541-201ENST00000384640 113 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-101P-201ENST00000410323 104 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 RNU2-64P-201ENST00000411315 191 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.637-201ENST00000459424 114 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.714-201ENST00000517065 90 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
SMIM28A0A1B0GU29 RNU4-90P-201ENST00000362773 141 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 RNU1-133P-201ENST00000364867 167 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-290P-201ENST00000365212 101 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.569-201ENST00000384749 103 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 MIR200A-201ENST00000384875 90 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 MIR548P-201ENST00000408336 84 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AL392103.1-201ENST00000447000 198 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AC004812.1-201ENST00000540773 146 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AC020661.2-201ENST00000560114 134 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AC113195.1-201ENST00000579952 141 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 AC015726.2-201ENST00000620112 122 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 MIR4251-201ENST00000635819 61 ntBASIC0.73□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-1272P-201ENST00000362776 107 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.214-201ENST00000364201 112 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 SNORD38C-201ENST00000384381 69 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNA5SP95-201ENST00000410319 137 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-383P-201ENST00000410864 94 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-1137P-201ENST00000517073 99 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNU7-181P-201ENST00000517234 74 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 AC131281.1-201ENST00000522984 164 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 AC109810.1-201ENST00000534066 224 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 MIR4680-201ENST00000580906 66 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 MIR3171-201ENST00000584270 74 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 AL021707.8-201ENST00000609428 183 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 AC134503.1-201ENST00000633048 54 ntBASIC0.72□□□□□ -2.29
SMIM28A0A1B0GU29 Y_RNA.128-201ENST00000363391 112 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-899P-201ENST00000363947 107 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 MIR802-201ENST00000390235 94 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 RPS3AP1-201ENST00000413190 320 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 MTCO2P12-201ENST00000427426 682 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 RNU4-57P-201ENST00000515980 135 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-830P-201ENST00000516353 107 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-988P-201ENST00000519081 107 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 Pinc.1-201ENST00000616452 154 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 AC007742.2-201ENST00000618226 398 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 MIR6516-201ENST00000630554 81 ntBASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.16-201ENST00000362421 102 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.153-201ENST00000363615 91 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.210-201ENST00000364161 110 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.455-201ENST00000384230 98 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-1248P-201ENST00000391096 64 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 U8.17-201ENST00000391292 132 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 MTND5P22-201ENST00000458380 195 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-1132P-201ENST00000459214 107 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 AC091959.1-201ENST00000495857 238 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.721-201ENST00000517207 102 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 MIR2681-201ENST00000581814 105 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 AC006441.5-201ENST00000612680 209 ntBASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SMIM28A0A1B0GU29 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.19-201ENST00000362462 99 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-1205P-201ENST00000363625 106 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.158-201ENST00000363651 101 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 Y_RNA.380-201ENST00000365663 111 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 RNU6-662P-201ENST00000384253 104 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 BTF3P11-201ENST00000426582 477 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AL035398.1-201ENST00000430869 322 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 RNU7-25P-201ENST00000516544 62 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 SNORA40.15-201ENST00000516884 107 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AC036111.3-201ENST00000526389 112 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 MIR548AO-201ENST00000579992 96 ntBASIC0.69□□□□□ -2.3
SMIM28A0A1B0GU29 AL008718.3-201ENST00000610217 321 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms