Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 Y_RNA.304-201ENST00000365011 112 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-126P-201ENST00000516685 103 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 AC100767.1-201ENST00000528178 123 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 AL512310.8-201ENST00000550183 120 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 FAM106DP-201ENST00000586416 501 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 AL021707.8-201ENST00000609428 183 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 uc_338.4-201ENST00000616635 176 ntBASIC1.93□□□□□ -2.1
COL4A3BPQ9Y5P4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR626-201ENST00000385032 94 ntBASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR4662B-201ENST00000579498 81 ntBASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 AL442067.1-201ENST00000613261 223 ntBASIC1.92□□□□□ -2.1
COL4A3BPQ9Y5P4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 SNORD27-201ENST00000363981 72 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR526A1-201ENST00000384897 85 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-651P-201ENST00000411040 105 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 RNU6-970P-201ENST00000516312 107 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR3664-201ENST00000579074 99 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
COL4A3BPQ9Y5P4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.262-201ENST00000364641 102 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 AL049861.1-201ENST00000603130 150 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.9□□□□□ -2.11
COL4A3BPQ9Y5P4 AC068700.1-201ENST00000565862 3754 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU4-10P-201ENST00000364383 140 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 RPL39P39-201ENST00000455840 151 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 RN7SKP88-201ENST00000516847 250 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 AC090142.3-201ENST00000519012 385 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 7SK.8-201ENST00000612110 250 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 7SK.11-201ENST00000615477 250 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 AL365265.1-201ENST00000621045 234 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 7SK.13-201ENST00000622040 250 ntBASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.618-201ENST00000410949 107 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU6-1023P-201ENST00000516137 106 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU7-149P-201ENST00000516739 59 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
COL4A3BPQ9Y5P4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORA20.1-201ENST00000364790 130 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.292-201ENST00000364904 97 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU6-574P-201ENST00000384265 107 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD77.4-201ENST00000516158 81 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR4643-201ENST00000577473 78 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR3128-201ENST00000581957 66 ntBASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU4-17P-201ENST00000365598 141 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.401-201ENST00000383965 117 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.447-201ENST00000384184 113 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD72-201ENST00000390994 80 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORA17.3-201ENST00000391159 129 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 COX6CP14-201ENST00000469580 174 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU4-71P-201ENST00000516258 113 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 AC006441.5-201ENST00000612680 209 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR8065-201ENST00000620577 100 ntBASIC1.86□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.76-201ENST00000362931 109 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU6-268P-201ENST00000364174 107 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD58.1-201ENST00000391313 66 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD111.1-201ENST00000516421 86 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 AL391903.3-201ENST00000612158 163 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 Pinc.1-201ENST00000616452 154 ntBASIC1.85□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.65-201ENST00000362846 100 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.307-201ENST00000365022 117 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.489-201ENST00000384410 101 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 MIR616-201ENST00000385293 97 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORA26-201ENST00000391286 122 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORD116-28-201ENST00000516123 91 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 RN7SKP164-201ENST00000516138 266 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 RNA5SP458-201ENST00000516188 119 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 RNU6-830P-201ENST00000516353 107 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 SNORA74.3-201ENST00000517108 154 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 CYP3A52P-201ENST00000563326 91 ntBASIC1.84□□□□□ -2.11
COL4A3BPQ9Y5P4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU2-55P-201ENST00000411146 174 ntBASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 SNRPGP14-201ENST00000435400 219 ntBASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 AL603825.1-201ENST00000438481 80 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms