Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SHANK1Q9Y566 RNU6-823P-201ENST00000391042 103 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 RNU6-985P-201ENST00000410182 104 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
SHANK1Q9Y566 AC099513.1-201ENST00000490423 301 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.68□□□□□ -2.3
SHANK1Q9Y566 AC007485.1-201ENST00000616755 206 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 RNU6-797P-201ENST00000363101 109 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.813-201ENST00000364639 102 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AC024067.1-201ENST00000426199 223 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 BTF3P11-201ENST00000426582 477 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 SNRPGP14-201ENST00000435400 219 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 UBL5P1-201ENST00000507979 193 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 SEPT14P8-201ENST00000508026 178 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNU6-155P-201ENST00000516347 100 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNU4-77P-201ENST00000516692 156 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNU7-116P-201ENST00000516940 62 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AC055872.1-201ENST00000570978 278 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.772-201ENST00000606692 102 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AC040896.1-201ENST00000613819 479 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.172-201ENST00000363765 102 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 MIR15B-201ENST00000385045 98 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNU6-1248P-201ENST00000391096 64 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 U8.16-201ENST00000391279 133 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 RPS20P10-201ENST00000451209 253 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 SERF1AP1-201ENST00000514575 187 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 MIR3145-201ENST00000580727 82 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 MIR4680-201ENST00000580906 66 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 MIR4300-201ENST00000581016 96 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AC087685.1-201ENST00000587507 141 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AC243829.6-201ENST00000612652 106 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 AL589743.1-201ENST00000551932 2712 ntBASIC0.67□□□□□ -2.3
SHANK1Q9Y566 snoU2_19.2-201ENST00000363024 80 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.210-201ENST00000364161 110 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-450P-201ENST00000364654 107 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.336-201ENST00000365307 109 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.418-201ENST00000384029 102 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR526A1-201ENST00000384897 85 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-855P-201ENST00000410395 104 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.602-201ENST00000410535 92 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.66□□□□□ -2.3
SHANK1Q9Y566 AC104332.1-201ENST00000440471 797 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 HMGN2P32-201ENST00000444648 269 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-408P-201ENST00000515910 100 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-397P-201ENST00000516226 104 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-922P-201ENST00000516753 99 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 SCARNA24.2-201ENST00000516968 130 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR5692C2-201ENST00000577959 77 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR4723-201ENST00000585070 81 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR2909-201ENST00000617113 69 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.158-201ENST00000363651 101 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.341-201ENST00000365341 102 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-474P-201ENST00000384243 107 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 STAG3L5P-204ENST00000443759 179 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU7-12P-201ENST00000516030 62 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 RNU6-1007P-201ENST00000516586 107 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR2681-201ENST00000581814 105 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 MIR5188-201ENST00000583467 113 ntBASIC0.66□□□□□ -2.3
SHANK1Q9Y566 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.66□□□□□ -2.3
SHANK1Q9Y566 AC068700.1-201ENST00000565862 3754 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.587-201ENST00000391210 103 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 RNA5SP496-201ENST00000391240 109 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 MIR1252-201ENST00000408861 65 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 RNU6-121P-201ENST00000410525 99 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.65□□□□□ -2.31
SHANK1Q9Y566 MTCO1P5-201ENST00000433573 344 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 OR2A41P-201ENST00000473586 105 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 HMGN1P10-201ENST00000474557 553 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.65□□□□□ -2.31
SHANK1Q9Y566 RNU7-115P-201ENST00000516433 55 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 AP003733.2-201ENST00000529409 171 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.65□□□□□ -2.31
SHANK1Q9Y566 MIR3664-201ENST00000579074 99 ntBASIC0.65□□□□□ -2.31
SHANK1Q9Y566 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
SHANK1Q9Y566 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 SNORA33.2-201ENST00000365413 134 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 MIR522-201ENST00000385071 87 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 RNU2-55P-201ENST00000411146 174 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC233266.1-201ENST00000454518 96 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC245047.8-201ENST00000456455 284 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
SHANK1Q9Y566 MIR4724-201ENST00000579485 89 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC242852.1-201ENST00000612151 96 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AL391903.3-201ENST00000612158 163 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC244015.1-201ENST00000622301 99 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SHANK1Q9Y566 MT-TT-201ENST00000387460 66 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 RNU2-14P-201ENST00000411053 191 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms