Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-626P-201ENST00000363354 107 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 RNU6-716P-201ENST00000365621 103 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 SNORA24-201ENST00000384096 131 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 PCNPP3-201ENST00000393579 471 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 AC009161.1-201ENST00000417306 376 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 FCF1P4-201ENST00000448326 183 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 MIR2053-201ENST00000459295 91 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 RPL17P19-201ENST00000489069 552 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 RNU4-49P-201ENST00000516080 140 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 RNU7-116P-201ENST00000516940 62 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 MIR5188-201ENST00000583467 113 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 AP003357.1-201ENST00000604497 148 ntBASIC-0.14□□□□□ -2.43
HHLA3Q9XRX5 SNORA9.1-201ENST00000362412 131 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 SNORD114-26-201ENST00000363543 72 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 SNORA63C-201ENST00000364578 129 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 RNU6-99P-201ENST00000364721 107 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 AL590004.1-201ENST00000405321 300 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 MIR1278-201ENST00000408753 81 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 RNU2-16P-201ENST00000410712 136 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 MCFD2P1-201ENST00000417812 300 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 AC069271.1-201ENST00000445577 156 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 MTND3P10-201ENST00000450967 341 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 AC098826.2-201ENST00000452011 651 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 RNU6-314P-201ENST00000516574 104 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 RNU6-448P-201ENST00000517052 107 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 AC127455.1-201ENST00000565496 145 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 AC134878.1-201ENST00000619901 243 ntBASIC-0.15□□□□□ -2.43
HHLA3Q9XRX5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.16□□□□□ -2.43
HHLA3Q9XRX5 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 RNU6-593P-201ENST00000364716 112 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 U8.7-201ENST00000364940 136 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 MIR518F-201ENST00000384973 87 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 MIR548K-201ENST00000408406 116 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 MIR1257-201ENST00000408490 117 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AF228730.4-201ENST00000421457 183 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AC236972.2-201ENST00000434979 310 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 RPS3AP52-201ENST00000435639 297 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 RNU7-115P-201ENST00000516433 55 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 RNU6-506P-201ENST00000516553 94 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 RNA5SP330-201ENST00000517096 96 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AC022441.3-201ENST00000605737 136 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AC015540.1-201ENST00000615828 501 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.16□□□□□ -2.44
HHLA3Q9XRX5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 SNORD38B-201ENST00000384690 67 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 MIR588-201ENST00000384900 83 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 MIR644A-201ENST00000385262 94 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 MIR548F5-201ENST00000408421 86 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 RNU6-710P-201ENST00000410424 105 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 AC005042.3-201ENST00000453230 174 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 AC091951.2-201ENST00000500762 203 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 RNU6-470P-201ENST00000515954 104 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 RNA5SP268-201ENST00000516828 124 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 AL355297.3-201ENST00000604082 446 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 MIR8055-201ENST00000610739 97 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 AC011476.5-201ENST00000615594 130 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 SNORD38B-202ENST00000625943 69 ntBASIC-0.17□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 SNORA72.1-201ENST00000363485 129 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNY4P14-201ENST00000363656 96 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU6-127P-201ENST00000390897 107 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 SNORA69.1-201ENST00000390904 137 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU6-913P-201ENST00000390913 95 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 SNORA26.5-201ENST00000391215 123 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU7-67P-201ENST00000459003 62 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU6-120P-201ENST00000516077 103 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU7-25P-201ENST00000516544 62 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 AC005899.2-201ENST00000584353 90 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 MIR7107-201ENST00000611489 80 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 AP000770.2-201ENST00000623694 100 ntBASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.18□□□□□ -2.44
HHLA3Q9XRX5 RNU6-187P-201ENST00000384139 106 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 RNY3P4-201ENST00000384428 101 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 MIR145-201ENST00000384967 88 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 MIR643-201ENST00000385267 97 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 SNORD11-201ENST00000459124 84 ntBASIC-0.19□□□□□ -2.44
HHLA3Q9XRX5 snoU13.2-201ENST00000459201 104 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms