Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 MIR3122-201ENST00000577243 73 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 AC090425.1-201ENST00000610007 140 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 Y_RNA.253-201ENST00000364562 112 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 SNORA4.2-201ENST00000365313 147 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 MIR517C-201ENST00000385103 95 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 RNU6-970P-201ENST00000516312 107 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 MIR4422-201ENST00000581938 83 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 Z83818.1-201ENST00000603584 150 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.48□□□□□ -2.01
CDK11AQ9UQ88 RNU6-653P-201ENST00000363074 106 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RNU6-200P-201ENST00000364743 107 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RNU6-392P-201ENST00000364926 101 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RNU4-17P-201ENST00000365598 141 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RNU6-1031P-201ENST00000384773 107 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 SNORA67.6-201ENST00000391093 99 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RN7SKP101-201ENST00000411376 320 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 RPL30P13-201ENST00000418873 348 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 SNRPGP10-201ENST00000432323 225 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 AC108059.2-201ENST00000434626 151 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 AC130289.1-201ENST00000577321 73 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 BX248123.2-201ENST00000606318 124 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.47□□□□□ -2.01
CDK11AQ9UQ88 Y_RNA.24-201ENST00000362508 103 ntBASIC2.46□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.308-201ENST00000365043 101 ntBASIC2.46□□□□□ -2.02
CDK11AQ9UQ88 RNU6-383P-201ENST00000410864 94 ntBASIC2.46□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.700-201ENST00000516806 100 ntBASIC2.46□□□□□ -2.02
CDK11AQ9UQ88 AL591926.4-201ENST00000616895 298 ntBASIC2.46□□□□□ -2.02
CDK11AQ9UQ88 MIR411-201ENST00000362239 96 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 SNORD68-201ENST00000363214 84 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 RNU6-1209P-201ENST00000363655 107 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 RNU4-10P-201ENST00000364383 140 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 SNORD48-201ENST00000364953 64 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.327-201ENST00000365201 102 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 RNU6-969P-201ENST00000383900 105 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 AL138752.1-201ENST00000452964 351 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 RPL23AP91-201ENST00000569211 455 ntBASIC2.45□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.796-201ENST00000364268 102 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.242-201ENST00000364473 110 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.799-201ENST00000364992 102 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 RNU6-131P-201ENST00000391144 107 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 OR9P1P-201ENST00000496431 281 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 RN7SKP164-201ENST00000516138 266 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 AC024614.2-201ENST00000577584 372 ntBASIC2.44□□□□□ -2.02
CDK11AQ9UQ88 Y_RNA.297-201ENST00000364950 91 ntBASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 MLLT10P1-201ENST00000418346 262 ntBASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 Z98949.2-201ENST00000440996 144 ntBASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 AC087685.1-201ENST00000587507 141 ntBASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 AC068700.1-201ENST00000565862 3754 ntBASIC2.43□□□□□ -2.02
CDK11AQ9UQ88 U8.5-201ENST00000364528 136 ntBASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 HSPE1P24-201ENST00000450782 238 ntBASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 SNORA31.24-201ENST00000517232 57 ntBASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 MIR4762-201ENST00000585261 75 ntBASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 MIR7111-201ENST00000619751 72 ntBASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDK11AQ9UQ88 RNU6-1020P-201ENST00000363684 107 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 RNU6-103P-201ENST00000363686 107 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 SNORA7.1-201ENST00000363750 139 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 RNU6-493P-201ENST00000391321 108 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 RNU1-98P-201ENST00000458992 160 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 RNU6-138P-201ENST00000515952 107 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 RNY3P16-201ENST00000516338 101 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 SNORA77B-201ENST00000578179 125 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 AL391903.3-201ENST00000612158 163 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 ZNF209P-201ENST00000593450 2304 ntBASIC2.41□□□□□ -2.02
CDK11AQ9UQ88 ICE2P2-201ENST00000483823 2787 ntBASIC2.4□□□□□ -2.02
CDK11AQ9UQ88 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 RNU6-1084P-201ENST00000362498 107 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.229-201ENST00000364347 113 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.274-201ENST00000364714 101 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 RNU6-923P-201ENST00000364753 107 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 RNY3P5-201ENST00000384127 102 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 MIR522-201ENST00000385071 87 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 MIR616-201ENST00000385293 97 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 RNU1-78P-201ENST00000391248 165 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 MIR1278-201ENST00000408753 81 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 PGBD4P5-201ENST00000445958 426 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 MIR4421-201ENST00000578133 69 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 AC021506.2-201ENST00000612354 169 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 AL513423.1-201ENST00000621695 132 ntBASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDK11AQ9UQ88 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.7-201ENST00000362352 102 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.508-201ENST00000384502 114 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 RNU6-381P-201ENST00000391259 108 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.793-201ENST00000411222 111 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 AC245517.4-201ENST00000448601 281 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.644-201ENST00000459006 113 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms