Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 SNORD115-32-201ENST00000364079 82 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 RNU6-74P-201ENST00000384235 107 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 U8.15-201ENST00000390947 134 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 AC021146.9-201ENST00000512503 156 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 SNORD38.3-201ENST00000516599 73 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 RNU6-410P-201ENST00000517006 107 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 MIR4499-201ENST00000584834 69 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 U2.17-201ENST00000611454 95 ntBASIC-1.29□□□□□ -2.62
SHANK2Q9UPX8 RNU6-660P-201ENST00000364566 109 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 MIR1-2-201ENST00000384961 85 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 RNU6-325P-201ENST00000411132 105 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 AL500527.2-201ENST00000454105 95 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 AC011352.1-201ENST00000512300 793 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 AL133173.2-201ENST00000614270 90 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 uc_338.19-201ENST00000616808 99 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 AL163152.1-201ENST00000642001 374 ntBASIC-1.3□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 MTND2P18-201ENST00000419962 1030 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNU7-104P-201ENST00000459398 79 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RPL30P10-201ENST00000488148 337 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNU7-161P-201ENST00000517289 62 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 AP003072.1-201ENST00000531740 145 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 MIR5583-1-201ENST00000580941 59 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 MIR4280-201ENST00000582178 76 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 AL596211.1-201ENST00000569873 2277 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 SNORD50.1-201ENST00000362987 71 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNU6-454P-201ENST00000364292 107 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 SNORD56B-201ENST00000384713 71 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 MIR9-2-201ENST00000384838 87 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 MTATP6P17-201ENST00000431030 672 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNA5SP484-201ENST00000458857 111 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 SNORD27.1-201ENST00000516319 72 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.31□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 RNU6-721P-201ENST00000410155 105 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 RNU6-437P-201ENST00000459408 95 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 AC022616.4-201ENST00000522985 181 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 PIGPP4-201ENST00000584447 307 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 AC011458.1-201ENST00000604034 617 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 RNU6-767P-201ENST00000384132 107 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 RNU6-901P-201ENST00000384593 106 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 SNORA25.16-201ENST00000516741 121 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 CPDP1-201ENST00000579660 283 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 MIR4423-201ENST00000580922 80 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 AC109347.2-201ENST00000610220 349 ntBASIC-1.33□□□□□ -2.62
SHANK2Q9UPX8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 RNU6-865P-201ENST00000364772 107 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 AC096949.1-201ENST00000412047 152 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 SNORA19.3-201ENST00000516165 130 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 RNU6-706P-201ENST00000517229 104 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 AL356055.1-201ENST00000602528 446 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 AP001282.2-201ENST00000616149 309 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 uc_338.11-201ENST00000619132 160 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 AC009878.1-201ENST00000621819 340 ntBASIC-1.34□□□□□ -2.62
SHANK2Q9UPX8 SNORD114-7-201ENST00000362520 77 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 SNORD41.1-201ENST00000391000 69 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 AL391834.2-201ENST00000609982 546 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 AL391262.2-201ENST00000622466 494 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 AC099654.13-201ENST00000639774 207 ntBASIC-1.35□□□□□ -2.63
SHANK2Q9UPX8 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 GPR143P-201ENST00000434155 205 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 AL031667.1-201ENST00000440222 725 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 Vault.3-201ENST00000516676 95 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 AL512506.1-201ENST00000613918 449 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 MTND5P18-201ENST00000445624 1801 ntBASIC-1.36□□□□□ -2.63
SHANK2Q9UPX8 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 USP9YP30-201ENST00000430729 455 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 AC244505.6-201ENST00000452829 130 ntBASIC-1.37□□□□□ -2.63
SHANK2Q9UPX8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms