Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SNORA31.10-201ENST00000516482 106 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.71□□□□□ -1.82
LHX6Q9UPM6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX6Q9UPM6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.71□□□□□ -1.82
LHX6Q9UPM6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LHX6Q9UPM6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
LHX6Q9UPM6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LHX6Q9UPM6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX6Q9UPM6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX6Q9UPM6 Y_RNA.537-201ENST00000384626 109 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 RNU6-443P-201ENST00000384780 107 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 MIR520H-201ENST00000385126 88 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 SNORD28B-201ENST00000390993 75 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 MIR1262-201ENST00000408276 93 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 SNORA11.4-201ENST00000408823 129 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 AC093423.1-201ENST00000440817 142 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.7□□□□□ -1.82
LHX6Q9UPM6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX6Q9UPM6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 RNU6-499P-201ENST00000365615 107 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 RNU6-1067P-201ENST00000384752 107 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 SNORD77.2-201ENST00000391045 68 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 SNORA26.7-201ENST00000391288 122 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 AL034345.1-201ENST00000407768 123 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 Y_RNA.596-201ENST00000410462 109 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 Y_RNA.648-201ENST00000459455 110 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 RPS29P11-201ENST00000496507 171 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 RNA5SP168-201ENST00000516642 112 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 AP000753.3-201ENST00000604083 169 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 uc_338.32-201ENST00000615087 172 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 MIR7702-201ENST00000621931 59 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.69□□□□□ -1.82
LHX6Q9UPM6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LHX6Q9UPM6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 RNA5SP493-201ENST00000364115 91 ntBASIC3.68□□□□□ -1.82
LHX6Q9UPM6 RPL29P14-201ENST00000495837 428 ntBASIC3.68□□□□□ -1.82
LHX6Q9UPM6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 RNU6-303P-201ENST00000517091 106 ntBASIC3.68□□□□□ -1.82
LHX6Q9UPM6 MIR664A-201ENST00000626086 82 ntBASIC3.68□□□□□ -1.82
LHX6Q9UPM6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LHX6Q9UPM6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 RNU6-811P-201ENST00000384069 107 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 MIR1251-201ENST00000408552 70 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 AC074348.1-201ENST00000426503 132 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 SNORD123-201ENST00000459473 70 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 RNA5SP179-201ENST00000517284 121 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 CYP4A43P-201ENST00000568156 121 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 AC025627.2-201ENST00000576220 160 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 SNORD14A-201ENST00000606526 91 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LHX6Q9UPM6 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.67□□□□□ -1.82
LHX6Q9UPM6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 RNU6-663P-201ENST00000391105 106 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 AC093850.1-201ENST00000454121 251 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 AC091167.4-201ENST00000605079 184 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 Z97988.1-201ENST00000637697 135 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LHX6Q9UPM6 AL035425.3-201ENST00000564206 4996 ntBASIC3.66□□□□□ -1.82
LHX6Q9UPM6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX6Q9UPM6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
LHX6Q9UPM6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LHX6Q9UPM6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
LHX6Q9UPM6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 AC005326.1-201ENST00000429197 123 ntBASIC3.65□□□□□ -1.83
LHX6Q9UPM6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 MIR3945-201ENST00000581853 98 ntBASIC3.65□□□□□ -1.83
LHX6Q9UPM6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LHX6Q9UPM6 AL355596.1-201ENST00000565399 3996 ntBASIC3.64□□□□□ -1.83
LHX6Q9UPM6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
LHX6Q9UPM6 AP000648.3-201ENST00000623539 4507 ntBASIC3.64□□□□□ -1.83
LHX6Q9UPM6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX6Q9UPM6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.64□□□□□ -1.83
LHX6Q9UPM6 SNORD35B-201ENST00000363660 87 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms