Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
FOXD3Q9UJU5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
FOXD3Q9UJU5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
FOXD3Q9UJU5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
FOXD3Q9UJU5 AL589743.1-201ENST00000551932 2712 ntBASIC2.77□□□□□ -1.97
FOXD3Q9UJU5 AC007336.1-201ENST00000576365 3828 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 AL596211.1-201ENST00000569873 2277 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 MIR452-201ENST00000385020 85 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 RNA5SP89-201ENST00000410300 108 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 RNU2-7P-201ENST00000410794 178 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 RNU7-164P-201ENST00000459221 62 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 AC008885.1-201ENST00000514930 301 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 RNU7-12P-201ENST00000516030 62 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 MIR4305-201ENST00000583252 102 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 AC002984.1-201ENST00000591692 448 ntBASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
FOXD3Q9UJU5 SNORA1.2-201ENST00000365189 134 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 RNU6-998P-201ENST00000515894 101 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 UBL5P2-201ENST00000583788 219 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 U1.36-201ENST00000620684 176 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 MIR6852-201ENST00000621699 66 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 ICE2P2-201ENST00000483823 2787 ntBASIC2.75□□□□□ -1.97
FOXD3Q9UJU5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 SNORA4.2-201ENST00000365313 147 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.495-201ENST00000384435 112 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 MIR1267-201ENST00000408723 78 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 RNA5SP270-201ENST00000411361 118 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 RPS29P24-201ENST00000486345 171 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.694-201ENST00000516677 117 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 SUMO2P16-201ENST00000519475 264 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 AC090821.2-201ENST00000523552 176 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 AL513423.1-201ENST00000621695 132 ntBASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXD3Q9UJU5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 AC073325.2-201ENST00000339545 159 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 MIR450A1-201ENST00000362262 91 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RNU6-112P-201ENST00000363599 104 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.323-201ENST00000365157 109 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RNU6-554P-201ENST00000410466 106 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 AC107297.1-201ENST00000459991 176 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 UBE2DNL-203ENST00000474922 222 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RPL23AP63-201ENST00000498752 471 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RNU7-123P-201ENST00000515911 60 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 RNU6-94P-201ENST00000607728 107 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 AC009831.4-201ENST00000620744 325 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 AL137790.1-201ENST00000634283 177 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 AC093831.2-201ENST00000624393 3427 ntBASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
FOXD3Q9UJU5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 MIR22-201ENST00000362190 85 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.163-201ENST00000363702 113 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 SNORA5B-201ENST00000363786 132 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 RNU6-296P-201ENST00000384608 107 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 Y_RNA.549-201ENST00000384657 102 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 MIR181B1-201ENST00000385240 110 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 MIR1302-5-201ENST00000408164 150 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 RNA5SP501-201ENST00000410990 112 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 RPL23AP94-201ENST00000512518 302 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 RNA5SP437-201ENST00000517249 129 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 IGKV3-31-201ENST00000523109 329 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 MIR4709-201ENST00000577272 72 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 AL035470.1-201ENST00000622571 220 ntBASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
FOXD3Q9UJU5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 MIR302B-201ENST00000362188 73 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 RNU6-766P-201ENST00000362478 107 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 RNU6-414P-201ENST00000363705 104 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 Y_RNA.362-201ENST00000365518 110 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 SNORA70.7-201ENST00000384159 133 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 SNORA54-201ENST00000384281 123 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 SNORA46-201ENST00000384762 135 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 MIR136-201ENST00000385207 82 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 SNX2P2-201ENST00000424553 323 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 snoU13.27-201ENST00000459278 104 ntBASIC2.71□□□□□ -1.98
FOXD3Q9UJU5 RNU7-34P-201ENST00000459394 64 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms