Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU6-490P-201ENST00000362985 107 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-324P-201ENST00000363957 106 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.203-201ENST00000364106 102 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-442P-201ENST00000383968 104 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.412-201ENST00000384001 104 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-926P-201ENST00000384075 107 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-35P-201ENST00000384530 107 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.599-201ENST00000410489 109 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-1213P-201ENST00000517075 94 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 RNU6-94P-201ENST00000607728 107 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 AL355073.2-201ENST00000612106 557 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 Pinc.1-201ENST00000616452 154 ntBASIC0.42□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.329-201ENST00000365209 107 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 RNU6-396P-201ENST00000365369 105 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 Y_RNA.376-201ENST00000365638 108 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 RNU6-890P-201ENST00000384121 107 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 RNU6-370P-201ENST00000411008 104 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 PDCL2P1-201ENST00000419302 352 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 AC024067.1-201ENST00000426199 223 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 AC091951.2-201ENST00000500762 203 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 RNA5SP285-201ENST00000516619 119 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 MIR2681-201ENST00000581814 105 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 POLR3GP1-201ENST00000594073 261 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 AC133104.2-201ENST00000615272 193 ntBASIC0.41□□□□□ -2.34
CTNNA3Q9UI47 MIR1-1-201ENST00000362147 71 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU6-674P-201ENST00000363831 107 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.341-201ENST00000365341 102 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU4-45P-201ENST00000365469 141 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.474-201ENST00000384341 102 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.605-201ENST00000410577 105 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 MTCO2P27-201ENST00000420740 428 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU2-13P-201ENST00000515909 113 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU7-115P-201ENST00000516433 55 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 RNU6-1007P-201ENST00000516586 107 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 AC093027.1-201ENST00000546698 429 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 AC127455.1-201ENST00000565496 145 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 VN1R91P-201ENST00000594377 169 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 AC006441.5-201ENST00000612680 209 ntBASIC0.4□□□□□ -2.35
CTNNA3Q9UI47 SNORA1.2-201ENST00000365189 134 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 RNU6-1175P-201ENST00000365200 107 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 SNORD28B-201ENST00000390993 75 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 RNA5SP95-201ENST00000410319 137 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 RNU6-855P-201ENST00000410395 104 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 RNA5SP476-201ENST00000516613 103 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 U6.92-201ENST00000636464 89 ntBASIC0.39□□□□□ -2.35
CTNNA3Q9UI47 RNY3P11-201ENST00000364153 102 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 RNU6-268P-201ENST00000364174 107 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 SNORD81.2-201ENST00000365153 76 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 RNY1P8-201ENST00000383970 114 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 MIR559-201ENST00000385188 96 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 U8.17-201ENST00000391292 132 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.653-201ENST00000459091 95 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC024405.2-202ENST00000532731 184 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC008507.4-201ENST00000585464 127 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC113139.1-201ENST00000605049 239 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC084782.3-201ENST00000612282 578 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC092794.1-201ENST00000612734 582 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 JPX_2.1-201ENST00000614161 69 ntBASIC0.38□□□□□ -2.35
CTNNA3Q9UI47 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.148-201ENST00000363557 117 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 MIR628-201ENST00000385229 95 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 AF228730.4-201ENST00000421457 183 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 MTCO2P12-201ENST00000427426 682 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 MTND4P17-201ENST00000470444 350 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 NDUFA4P2-201ENST00000489989 244 ntBASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
CTNNA3Q9UI47 RNU6-1209P-201ENST00000363655 107 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.160-201ENST00000363677 92 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 RNU4-67P-201ENST00000364569 141 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 SNORD63-201ENST00000384262 68 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 SNORA2B-201ENST00000384583 137 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 MT-TL1-201ENST00000386347 75 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CTNNA3Q9UI47 SNORD81.1-201ENST00000363064 77 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 U8.7-201ENST00000364940 136 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 RNU6-708P-201ENST00000384217 107 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 MIR570-201ENST00000384917 97 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 RNU6-847P-201ENST00000411115 108 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 MTCO3P10-201ENST00000455912 772 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 SCARNA8-201ENST00000515924 131 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 MIR4300-201ENST00000581016 96 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 AC011476.5-201ENST00000615594 130 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 MIR548AY-201ENST00000617669 107 ntBASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
CTNNA3Q9UI47 Y_RNA.314-201ENST00000365114 102 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 SNORA51.10-201ENST00000384418 136 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 RNU7-169P-201ENST00000459456 61 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 HAR1A.1-201ENST00000459583 118 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 RPL23AP54-201ENST00000495129 419 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.713-201ENST00000517013 96 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms