Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 Y_RNA.29-201ENST00000362570 113 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 Y_RNA.121-201ENST00000363309 113 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNU6-103P-201ENST00000363686 107 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNY3P5-201ENST00000384127 102 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 MIR802-201ENST00000390235 94 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNU6-381P-201ENST00000391259 108 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 U8.16-201ENST00000391279 133 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 MIR1278-201ENST00000408753 81 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 AC004965.1-201ENST00000413033 213 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 CALM2P4-201ENST00000430810 426 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 HMGN2P32-201ENST00000444648 269 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 Y_RNA.644-201ENST00000459006 113 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 SNORD11-201ENST00000459124 84 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNU7-12P-201ENST00000516030 62 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 Y_RNA.674-201ENST00000516362 113 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 Y_RNA.676-201ENST00000516393 96 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 RNU6-126P-201ENST00000516685 103 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 MIR3198-2-201ENST00000577868 80 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 AL391903.3-201ENST00000612158 163 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 SNORD3E-202ENST00000627253 216 ntBASIC1.89□□□□□ -2.11
COL20A1Q9P218 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
COL20A1Q9P218 Y_RNA.7-201ENST00000362352 102 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 RNU6-1020P-201ENST00000363684 107 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 Y_RNA.229-201ENST00000364347 113 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 MIR194-1-201ENST00000384892 85 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 MIR616-201ENST00000385293 97 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.88□□□□□ -2.11
COL20A1Q9P218 uc_338.4-201ENST00000616635 176 ntBASIC1.88□□□□□ -2.11
COL20A1Q9P218 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL20A1Q9P218 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL20A1Q9P218 MIRLET7C-201ENST00000362160 84 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 RNU6-833P-201ENST00000363486 107 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 SNORD14E-201ENST00000364009 85 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 RNU6-203P-201ENST00000384038 104 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 RNU6-1228P-201ENST00000391014 107 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 RNU6-918P-201ENST00000391219 106 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 RNU6-493P-201ENST00000391321 108 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 MIR891A-201ENST00000401237 79 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.87□□□□□ -2.11
COL20A1Q9P218 snoU13.9-201ENST00000458927 103 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 SNORD45.4-201ENST00000516629 73 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 SNORA81.3-201ENST00000517283 198 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.87□□□□□ -2.11
COL20A1Q9P218 MIR4662B-201ENST00000579498 81 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 MIR4308-201ENST00000580634 81 ntBASIC1.87□□□□□ -2.11
COL20A1Q9P218 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL20A1Q9P218 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL20A1Q9P218 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 snoU2_19.4-201ENST00000364329 80 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 RNU6-923P-201ENST00000364753 107 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 Y_RNA.336-201ENST00000365307 109 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 Y_RNA.793-201ENST00000411222 111 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 RNU2-64P-201ENST00000411315 191 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AL161935.2-201ENST00000414627 60 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 BTF3P4-201ENST00000418852 495 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 RNY3P16-201ENST00000516338 101 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 RNU6-182P-201ENST00000516970 105 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 SNORA77B-201ENST00000578179 125 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AL049861.1-201ENST00000603130 150 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
COL20A1Q9P218 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
COL20A1Q9P218 NDUFA4P2-201ENST00000489989 244 ntBASIC1.85□□□□□ -2.11
COL20A1Q9P218 AC114811.1-201ENST00000507207 168 ntBASIC1.85□□□□□ -2.11
COL20A1Q9P218 AC072026.1-201ENST00000605023 201 ntBASIC1.85□□□□□ -2.11
COL20A1Q9P218 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.85□□□□□ -2.11
COL20A1Q9P218 Y_RNA.238-201ENST00000364441 102 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 SNORD50B-201ENST00000364995 70 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 Y_RNA.571-201ENST00000384753 98 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 Y_RNA.572-201ENST00000384757 98 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 RNU6-907P-201ENST00000390924 102 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 Y_RNA.587-201ENST00000391210 103 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 RNU2-55P-201ENST00000411146 174 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 PIGPP3-201ENST00000425307 415 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 RNU7-120P-201ENST00000459334 63 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.84□□□□□ -2.11
COL20A1Q9P218 AC008507.4-201ENST00000585464 127 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 AC095038.3-201ENST00000634439 195 ntBASIC1.84□□□□□ -2.11
COL20A1Q9P218 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL20A1Q9P218 ICE2P2-201ENST00000483823 2787 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 RNU6-1138P-201ENST00000365359 106 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 RNU6-47P-201ENST00000383866 107 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 RNU4-70P-201ENST00000384579 139 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 MIR513A1-201ENST00000385138 129 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 SNORA26-201ENST00000391286 122 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 AL606845.1-201ENST00000404881 255 ntBASIC1.83□□□□□ -2.12
COL20A1Q9P218 MIR1323-201ENST00000408090 73 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms