Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR18B-201ENST00000454574 71 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 snoU13.16-201ENST00000459350 104 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 RPL17P19-201ENST00000489069 552 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 RNU6-470P-201ENST00000515954 104 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 AC015540.1-201ENST00000615828 501 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 MIR6740-201ENST00000618268 113 ntBASIC-0.16□□□□□ -2.44
VAPAQ9P0L0 SNORA9.1-201ENST00000362412 131 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 SNORA36.1-201ENST00000363424 132 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RNU6-593P-201ENST00000364716 112 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RNU6-601P-201ENST00000384540 107 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 SNORD72-201ENST00000390994 80 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 MIR1257-201ENST00000408490 117 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RNU6-710P-201ENST00000410424 105 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RPS3AP52-201ENST00000435639 297 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RNU7-185P-201ENST00000459215 60 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 RNU6-506P-201ENST00000516553 94 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 AC024405.2-202ENST00000532731 184 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 AC134878.1-201ENST00000619901 243 ntBASIC-0.17□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR593-201ENST00000384856 100 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR518F-201ENST00000384973 87 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR613-201ENST00000385248 95 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR643-201ENST00000385267 97 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 PCNPP3-201ENST00000393579 471 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR548F5-201ENST00000408421 86 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MCFD2P1-201ENST00000417812 300 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MTND3P10-201ENST00000450967 341 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 RNU6-448P-201ENST00000517052 107 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 MIR5188-201ENST00000583467 113 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 AC005899.2-201ENST00000584353 90 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 SNORD92-201ENST00000585078 85 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 AL355297.3-201ENST00000604082 446 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 AP003357.1-201ENST00000604497 148 ntBASIC-0.18□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 SNORD38B-201ENST00000384690 67 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 SNORA69.1-201ENST00000390904 137 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 AC098826.2-201ENST00000452011 651 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 RNU7-67P-201ENST00000459003 62 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 AC107297.1-201ENST00000459991 176 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 RNA5SP330-201ENST00000517096 96 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 AC006441.5-201ENST00000612680 209 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 PISRT1.1-201ENST00000616930 107 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 SNORD38B-202ENST00000625943 69 ntBASIC-0.19□□□□□ -2.44
VAPAQ9P0L0 MIR588-201ENST00000384900 83 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 AL603910.2-201ENST00000407268 136 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 AC005730.3-201ENST00000583067 366 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 AC011476.5-201ENST00000615594 130 ntBASIC-0.2□□□□□ -2.44
VAPAQ9P0L0 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 U8.7-201ENST00000364940 136 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 MIR145-201ENST00000384967 88 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 AL590004.1-201ENST00000405321 300 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 MIR548K-201ENST00000408406 116 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 MIR1278-201ENST00000408753 81 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNA5SP118-201ENST00000410385 109 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 AC069271.1-201ENST00000445577 156 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNU6-307P-201ENST00000516743 106 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNA5SP268-201ENST00000516828 124 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 AC127455.1-201ENST00000565496 145 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 MIR2909-201ENST00000617113 69 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 AC022306.2-201ENST00000617563 647 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 AC087588.2-201ENST00000617667 426 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 MIR6755-201ENST00000619993 66 ntBASIC-0.21□□□□□ -2.44
VAPAQ9P0L0 RNA5SP325-201ENST00000363756 130 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 MIR625-201ENST00000385047 85 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 MIR610-201ENST00000385139 96 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 PRDX4P1-201ENST00000507189 574 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 RNU6-469P-201ENST00000516253 101 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 RNU7-115P-201ENST00000516433 55 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 RNU6-958P-201ENST00000516995 106 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 AC245505.1-201ENST00000556398 224 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 MIR2681-201ENST00000581814 105 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 AC022441.3-201ENST00000605737 136 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.22□□□□□ -2.44
VAPAQ9P0L0 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 RNY4P14-201ENST00000363656 96 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 RNU6-756P-201ENST00000383997 107 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 SNORA24-201ENST00000384096 131 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms