Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 Y_RNA.686-201ENST00000516548 134 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 AL513423.1-201ENST00000621695 132 ntBASIC2.55□□□□□ -2
UBP1Q9NZI7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.55□□□□□ -2
UBP1Q9NZI7 AL136360.1-201ENST00000503377 1900 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 AC087499.4-201ENST00000448505 178 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.54□□□□□ -2
UBP1Q9NZI7 RNU6-1333P-201ENST00000516162 93 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 RNU6-830P-201ENST00000516353 107 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 Y_RNA.690-201ENST00000516603 95 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 AC090049.2-201ENST00000550377 109 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 MIR5197-201ENST00000583721 112 ntBASIC2.54□□□□□ -2
UBP1Q9NZI7 RNA5SP205-201ENST00000364653 136 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 SNORD23.1-201ENST00000408212 104 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 AL445646.1-201ENST00000431784 216 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 AC055731.1-201ENST00000474387 401 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 RNU7-12P-201ENST00000516030 62 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 RNU6-1234P-201ENST00000516877 103 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 RNU2-60P-201ENST00000517290 128 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 MIR3121-201ENST00000579680 77 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
UBP1Q9NZI7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UBP1Q9NZI7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 MIR27B-201ENST00000385129 97 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 RNU6-360P-201ENST00000390944 104 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.52□□□□□ -2.01
UBP1Q9NZI7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.52□□□□□ -2.01
UBP1Q9NZI7 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 AC021506.2-201ENST00000612354 169 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 AC015726.2-201ENST00000620112 122 ntBASIC2.52□□□□□ -2.01
UBP1Q9NZI7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBP1Q9NZI7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBP1Q9NZI7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBP1Q9NZI7 RNA5SP68-201ENST00000363885 119 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.280-201ENST00000364765 112 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 RNA5SP148-201ENST00000516527 94 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 MIR4298-201ENST00000584380 73 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 MIR6817-201ENST00000615588 66 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
UBP1Q9NZI7 AC008555.8-201ENST00000623602 2168 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 MTND5P32-201ENST00000560711 1802 ntBASIC2.51□□□□□ -2.01
UBP1Q9NZI7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBP1Q9NZI7 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 MIR452-201ENST00000385020 85 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 AC015922.2-201ENST00000435593 184 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 AL158147.1-201ENST00000443970 75 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 PGBD4P5-201ENST00000445958 426 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 RNA5SP236-201ENST00000516169 116 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 RNU6-659P-201ENST00000516454 104 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 RNU6-1149P-201ENST00000516810 97 ntBASIC2.5□□□□□ -2.01
UBP1Q9NZI7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.114-201ENST00000363265 113 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 RNU6-647P-201ENST00000364243 107 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.261-201ENST00000364631 102 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 MIR660-201ENST00000385235 97 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.49□□□□□ -2.01
UBP1Q9NZI7 RNU6-113P-201ENST00000516653 101 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 SCARNA15-202ENST00000516881 127 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 MIR4513-201ENST00000581077 86 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.49□□□□□ -2.01
UBP1Q9NZI7 AL359881.1-201ENST00000602916 267 ntBASIC2.49□□□□□ -2.01
UBP1Q9NZI7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBP1Q9NZI7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UBP1Q9NZI7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
UBP1Q9NZI7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UBP1Q9NZI7 RNA5SP212-201ENST00000391223 107 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.629-201ENST00000411368 105 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 HMGN2P35-201ENST00000412164 270 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 AC099513.1-201ENST00000490423 301 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 AP003484.1-201ENST00000530974 250 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 AL022345.2-201ENST00000606307 135 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 U4.3-201ENST00000621047 82 ntBASIC2.48□□□□□ -2.01
UBP1Q9NZI7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
UBP1Q9NZI7 MIR424-201ENST00000362227 98 ntBASIC2.47□□□□□ -2.01
UBP1Q9NZI7 RNU6-309P-201ENST00000364573 106 ntBASIC2.47□□□□□ -2.01
UBP1Q9NZI7 Y_RNA.294-201ENST00000364916 102 ntBASIC2.47□□□□□ -2.01
UBP1Q9NZI7 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
UBP1Q9NZI7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.47□□□□□ -2.01
UBP1Q9NZI7 RPL12P50-201ENST00000603116 116 ntBASIC2.47□□□□□ -2.01
UBP1Q9NZI7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.46□□□□□ -2.02
UBP1Q9NZI7 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 SNORA25.6-201ENST00000364121 118 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 SNORA2.2-201ENST00000365473 135 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 Y_RNA.563-201ENST00000384707 108 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 AL627390.1-201ENST00000396055 340 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 Y_RNA.712-201ENST00000517011 92 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.46□□□□□ -2.02
UBP1Q9NZI7 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 SNORD3E-202ENST00000627253 216 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 MIR376A2-201ENST00000636782 80 ntBASIC2.46□□□□□ -2.02
UBP1Q9NZI7 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms