Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 PART1_1.1-201ENST00000611761 217 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 AC008133.2-201ENST00000624540 351 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.66□□□□□ -2.3
SMPD3Q9NY59 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.66□□□□□ -2.3
SMPD3Q9NY59 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SMPD3Q9NY59 AL442644.1-201ENST00000454390 3105 ntBASIC0.66□□□□□ -2.3
SMPD3Q9NY59 SNORA36B-201ENST00000410438 131 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 AC010655.3-201ENST00000478818 450 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 NDUFA4P2-201ENST00000489989 244 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.65□□□□□ -2.31
SMPD3Q9NY59 RNA5SP102-201ENST00000516865 106 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 uc_338.22-201ENST00000622722 187 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 MIR4251-201ENST00000635819 61 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 AC134026.1-201ENST00000623249 2239 ntBASIC0.65□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.36-201ENST00000362602 112 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 SNORD114-27-201ENST00000363766 70 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 RNU6-674P-201ENST00000363831 107 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.286-201ENST00000364813 102 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 SNORA72.4-201ENST00000384174 132 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 RNU6-1007P-201ENST00000516586 107 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 RPL23AP91-201ENST00000569211 455 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 AC008507.4-201ENST00000585464 127 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.813-201ENST00000364639 102 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.431-201ENST00000384086 102 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 MIR1278-201ENST00000408753 81 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 RNU2-14P-201ENST00000411053 191 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC022028.1-201ENST00000412054 408 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.63□□□□□ -2.31
SMPD3Q9NY59 RNU6-830P-201ENST00000516353 107 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 RNU6-1046P-201ENST00000516538 107 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 RNU11-2P-201ENST00000516898 142 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 MIR548AR-201ENST00000582191 57 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 AL136317.1-201ENST00000612653 226 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 MIR376A1-201ENST00000616574 68 ntBASIC0.63□□□□□ -2.31
SMPD3Q9NY59 MIR369-201ENST00000362155 70 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 SNORD113-8-201ENST00000363497 74 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 RNU6-801P-201ENST00000364087 105 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 RNY1-201ENST00000364228 113 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.242-201ENST00000364473 110 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 SNORA63.7-201ENST00000365579 123 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.370-201ENST00000365589 108 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.395-201ENST00000383945 109 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 MIR7-2-201ENST00000384970 110 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 SNORD28B-201ENST00000390993 75 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 MIR1276-201ENST00000408707 83 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 SNRPGP14-201ENST00000435400 219 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.62□□□□□ -2.31
SMPD3Q9NY59 MTND4P19-201ENST00000446659 478 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.62□□□□□ -2.31
SMPD3Q9NY59 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 SNORA4-201ENST00000584302 138 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AC104695.3-201ENST00000604052 296 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 AC124312.5-201ENST00000604451 268 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 LARP7P1-201ENST00000605576 316 ntBASIC0.62□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.222-201ENST00000364264 102 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.445-201ENST00000384168 102 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 MIR489-201ENST00000384923 84 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 RNU6-308P-201ENST00000390957 107 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 SNORA26.5-201ENST00000391215 123 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 U8.17-201ENST00000391292 132 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 MTCO2P33-201ENST00000402100 465 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.602-201ENST00000410535 92 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.61□□□□□ -2.31
SMPD3Q9NY59 RNU6-397P-201ENST00000516226 104 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 RNU6-191P-201ENST00000516295 94 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 MIR3973-201ENST00000579824 107 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 MIR4300-201ENST00000581016 96 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC136443.5-201ENST00000603741 370 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 MIR6515-201ENST00000619843 57 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC090971.5-201ENST00000621102 293 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 AC090574.1-201ENST00000623186 233 ntBASIC0.61□□□□□ -2.31
SMPD3Q9NY59 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SMPD3Q9NY59 RNU6-899P-201ENST00000363947 107 ntBASIC0.6□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.418-201ENST00000384029 102 ntBASIC0.6□□□□□ -2.31
SMPD3Q9NY59 Y_RNA.419-201ENST00000384041 102 ntBASIC0.6□□□□□ -2.31
SMPD3Q9NY59 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
SMPD3Q9NY59 SNORD72-201ENST00000390994 80 ntBASIC0.6□□□□□ -2.31
SMPD3Q9NY59 SNORD111-201ENST00000408139 94 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms