Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 SNORD14.1-201ENST00000365609 90 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.579-201ENST00000390939 94 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 RNU6-1009P-201ENST00000390996 107 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 MIR1278-201ENST00000408753 81 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 RNU6-710P-201ENST00000410424 105 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 RNU2-14P-201ENST00000411053 191 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 RPL23AP54-201ENST00000495129 419 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 RNU7-115P-201ENST00000516433 55 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 AP003357.1-201ENST00000604497 148 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 AL121655.1-201ENST00000605811 308 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 PART1_1.1-201ENST00000611761 217 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 RNU1-115P-201ENST00000365329 160 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 RNY3P14-201ENST00000384309 102 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.551-201ENST00000384661 102 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 MTND5P20-201ENST00000448677 143 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 HMGN1P10-201ENST00000474557 553 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 SNORA40.14-201ENST00000516543 86 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 AC127455.1-201ENST00000565496 145 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 MIR548AR-201ENST00000582191 57 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 MIR4795-201ENST00000584182 89 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 RPS29P30-201ENST00000600975 111 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 AC006157.1-201ENST00000611750 366 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 AC007485.1-201ENST00000616755 206 ntBASIC0.54□□□□□ -2.32
KLHL28Q9NXS3 AC134026.1-201ENST00000623249 2239 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 RNU4-73P-201ENST00000363164 141 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 MIR570-201ENST00000384917 97 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 MIR15B-201ENST00000385045 98 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 SNRPGP14-201ENST00000435400 219 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 RNU6-976P-201ENST00000516086 111 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 RNU7-43P-201ENST00000516554 64 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 RNU7-116P-201ENST00000516940 62 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 MIR548S-201ENST00000581352 82 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 RNU6-94P-201ENST00000607728 107 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 MIR548AY-201ENST00000617669 107 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
KLHL28Q9NXS3 AC068700.1-201ENST00000565862 3754 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 RNU4-80P-201ENST00000363200 141 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 SNORD14E-201ENST00000364009 85 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 RNU6-801P-201ENST00000364087 105 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.383-201ENST00000383855 97 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.439-201ENST00000384119 94 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 SNORD63-201ENST00000384262 68 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 SNORD72-201ENST00000390994 80 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 AC236972.2-201ENST00000434979 310 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 HMGN2P32-201ENST00000444648 269 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 RNU7-141P-201ENST00000459304 62 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 U8.20-201ENST00000459445 131 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 RNU6-1046P-201ENST00000516538 107 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.702-201ENST00000516843 96 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 AC040926.1-201ENST00000530195 238 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 MIR4801-201ENST00000582704 82 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
KLHL28Q9NXS3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 RNA5SP48-201ENST00000363969 126 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.197-201ENST00000364004 102 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 RNU6-21P-201ENST00000384710 107 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 RNU6-308P-201ENST00000390957 107 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 SNORA26.5-201ENST00000391215 123 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 RNA5SP95-201ENST00000410319 137 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AL392103.1-201ENST00000447000 198 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 U8.19-201ENST00000459095 133 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 MTND3P22-201ENST00000510932 243 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AC036111.3-201ENST00000526389 112 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 Z83818.1-201ENST00000603584 150 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 JPX_2.1-201ENST00000614161 69 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AL138825.1-201ENST00000618587 192 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 AC008133.2-201ENST00000624540 351 ntBASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.51□□□□□ -2.33
KLHL28Q9NXS3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.5□□□□□ -2.33
KLHL28Q9NXS3 SNORD114-23-201ENST00000363536 72 ntBASIC0.5□□□□□ -2.33
KLHL28Q9NXS3 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
KLHL28Q9NXS3 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
KLHL28Q9NXS3 RNU6-268P-201ENST00000364174 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms