Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 MIR340-201ENST00000362125 95 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 MIR302B-201ENST00000362188 73 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SNORA68.1-201ENST00000364537 132 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 MIR1261-201ENST00000408659 82 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 Z98742.3-201ENST00000418637 326 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 RNU6-893P-201ENST00000458841 100 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 RPS29P21-201ENST00000496272 170 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 AC026436.1-201ENST00000510537 270 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 RNU2-34P-201ENST00000516534 121 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SUMO2P16-201ENST00000519475 264 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 U8.2-201ENST00000363156 134 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU1-96P-201ENST00000364163 162 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-461P-201ENST00000364195 107 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-690P-201ENST00000365242 106 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-438P-201ENST00000365561 103 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 SNORA70B-201ENST00000384210 135 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 MIR520G-201ENST00000385064 90 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-972P-201ENST00000391208 107 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 RNA5SP395-201ENST00000516567 118 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 AC021443.1-201ENST00000604478 211 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 AC015726.2-201ENST00000620112 122 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 MIR2052-201ENST00000636055 55 ntBASIC2.49□□□□□ -2.01
SMPD4Q9NXE4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 MIR548D2-201ENST00000384955 97 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC060773.1-201ENST00000421698 310 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC233266.1-201ENST00000454518 96 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 RNU7-123P-201ENST00000515911 60 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 RNA5SP490-201ENST00000517141 136 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC103810.6-201ENST00000606708 136 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC242852.1-201ENST00000612151 96 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 AC244015.1-201ENST00000622301 99 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 ZNF658B-202ENST00000615961 3375 ntBASIC2.48□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.17-201ENST00000362433 111 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU6-1124P-201ENST00000384169 107 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 AC009238.1-201ENST00000442165 424 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 AC009237.6-201ENST00000446969 424 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNA5SP112-201ENST00000515937 99 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU1-41P-201ENST00000516161 162 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU1-48P-201ENST00000516400 162 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU6-856P-201ENST00000516959 98 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RNU6-586P-201ENST00000517265 104 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 FAM71BP1-201ENST00000604431 523 ntBASIC2.47□□□□□ -2.01
SMPD4Q9NXE4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SMPD4Q9NXE4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 SNORA63D-201ENST00000364359 132 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 SNORA2.2-201ENST00000365473 135 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 HMGN2P34-201ENST00000437647 269 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 AL445687.1-201ENST00000439946 251 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 AC002984.1-201ENST00000591692 448 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 AL162726.3-218ENST00000636401 95 ntBASIC2.46□□□□□ -2.02
SMPD4Q9NXE4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 RNU6-743P-201ENST00000364151 106 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 MIR548O-201ENST00000408583 114 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 RNU7-164P-201ENST00000459221 62 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 RNU2-35P-201ENST00000516446 142 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 RNU7-25P-201ENST00000516544 62 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 SNORD36C-201ENST00000516733 66 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 HSPE1P19-201ENST00000603327 295 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 AC022217.4-201ENST00000604389 163 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 U6.108-201ENST00000637764 58 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 MIR7515-201ENST00000637837 67 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 ZNF271P-202ENST00000465539 1970 ntBASIC2.45□□□□□ -2.02
SMPD4Q9NXE4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms