Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 Y_RNA.307-201ENST00000365022 117 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 RNU6-969P-201ENST00000383900 105 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.447-201ENST00000384184 113 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 MT-TG-201ENST00000387429 68 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 SNORA12.1-201ENST00000390873 148 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 SNORD58.1-201ENST00000391313 66 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.6□□□□□ -2.15
DDX4Q9NQI0 AL161935.2-201ENST00000414627 60 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 SNRPGP10-201ENST00000432323 225 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 CYCTP-201ENST00000504253 315 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.6□□□□□ -2.15
DDX4Q9NQI0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
DDX4Q9NQI0 MIR3660-201ENST00000584845 100 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 AL442067.1-201ENST00000613261 223 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 SNORD68-201ENST00000363214 84 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 SNORD27-201ENST00000363981 72 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 SNORA8.3-201ENST00000384679 139 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 MIR660-201ENST00000385235 97 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 RNU6-131P-201ENST00000391144 107 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 RNA5SP496-201ENST00000391240 109 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.59□□□□□ -2.15
DDX4Q9NQI0 Z98949.2-201ENST00000440996 144 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AC023449.1-201ENST00000454464 154 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
DDX4Q9NQI0 MIR3128-201ENST00000581957 66 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AC027279.3-201ENST00000625055 122 ntBASIC1.59□□□□□ -2.15
DDX4Q9NQI0 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.16
DDX4Q9NQI0 WWP1P1-201ENST00000466609 2769 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.188-201ENST00000363952 111 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 RNU6-338P-201ENST00000383888 105 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 MIR522-201ENST00000385071 87 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 RNU4-71P-201ENST00000516258 113 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 RNA5SP102-201ENST00000516865 106 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 SNORA77B-201ENST00000578179 125 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 AC006006.1-201ENST00000603082 144 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 AC120024.3-201ENST00000603167 156 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 SNORD3E-202ENST00000627253 216 ntBASIC1.58□□□□□ -2.16
DDX4Q9NQI0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
DDX4Q9NQI0 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.60-201ENST00000362831 98 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.477-201ENST00000384352 108 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 SNORA40.6-201ENST00000391153 128 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 CALM2P4-201ENST00000430810 426 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 HMGN2P32-201ENST00000444648 269 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 HSPE1P24-201ENST00000450782 238 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 COX6CP14-201ENST00000469580 174 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 MTND1P19-201ENST00000511780 315 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 AC100767.1-201ENST00000528178 123 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
DDX4Q9NQI0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
DDX4Q9NQI0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
DDX4Q9NQI0 ICE2P2-201ENST00000483823 2787 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 MIRLET7C-201ENST00000362160 84 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.292-201ENST00000364904 97 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 RNU6-163P-201ENST00000384396 106 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 MIR513A1-201ENST00000385138 129 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 U8.16-201ENST00000391279 133 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 MIR891A-201ENST00000401237 79 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.56□□□□□ -2.16
DDX4Q9NQI0 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
DDX4Q9NQI0 RPL23AP91-201ENST00000569211 455 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 MIR4643-201ENST00000577473 78 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.56□□□□□ -2.16
DDX4Q9NQI0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
DDX4Q9NQI0 RNU6-833P-201ENST00000363486 107 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.262-201ENST00000364641 102 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.539-201ENST00000384635 107 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 RNU6-651P-201ENST00000411040 105 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 MLLT10P1-201ENST00000418346 262 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 RNU7-12P-201ENST00000516030 62 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 RNU6-1271P-201ENST00000517049 105 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 AC091895.1-201ENST00000624494 256 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 AC095038.3-201ENST00000634439 195 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
DDX4Q9NQI0 MIR96-201ENST00000362288 78 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.76-201ENST00000362931 109 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 MIR626-201ENST00000385032 94 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 SNORD11-201ENST00000459124 84 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.680-201ENST00000516441 93 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 MIR6504-201ENST00000613520 61 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 MIR7111-201ENST00000619751 72 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 AL365265.1-201ENST00000621045 234 ntBASIC1.54□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.65-201ENST00000362846 100 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms