Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 AL596211.1-201ENST00000569873 2277 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 RNU1-58P-201ENST00000362413 163 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 RNU6-268P-201ENST00000364174 107 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 RNU6-690P-201ENST00000365242 106 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 Y_RNA.617-201ENST00000410920 90 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 CALM2P4-201ENST00000430810 426 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.23□□□□□ -2.05
MSL2Q9HCI7 RNA5SP236-201ENST00000516169 116 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 AC024995.1-201ENST00000523014 93 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.23□□□□□ -2.05
MSL2Q9HCI7 AL137067.1-201ENST00000615933 120 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 MIR8054-201ENST00000620877 86 ntBASIC2.23□□□□□ -2.05
MSL2Q9HCI7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.23□□□□□ -2.05
MSL2Q9HCI7 MIR6073-201ENST00000352083 89 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 SNORD115-28-201ENST00000363931 81 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 Y_RNA.346-201ENST00000365385 112 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 RNU1-148P-201ENST00000384472 162 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 RNU7-34P-201ENST00000459394 64 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 MIR5197-201ENST00000583721 112 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 HSPE1P19-201ENST00000603327 295 ntBASIC2.22□□□□□ -2.05
MSL2Q9HCI7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.22□□□□□ -2.05
MSL2Q9HCI7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.22□□□□□ -2.05
MSL2Q9HCI7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.22□□□□□ -2.05
MSL2Q9HCI7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
MSL2Q9HCI7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.05
MSL2Q9HCI7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 RNU6-147P-201ENST00000383983 107 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 MIR516B2-201ENST00000385190 85 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 HMGN2P3-201ENST00000433603 273 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 HMGN2P5-201ENST00000436882 273 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 AL358944.1-201ENST00000528537 144 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 AC006023.1-201ENST00000603944 259 ntBASIC2.21□□□□□ -2.06
MSL2Q9HCI7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
MSL2Q9HCI7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MSL2Q9HCI7 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 RNU6-1292P-201ENST00000383856 107 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 RNU6-880P-201ENST00000384526 107 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 RNA5SP482-201ENST00000391269 118 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 U8.17-201ENST00000391292 132 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 AC093850.1-201ENST00000454121 251 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 SNORA31.10-201ENST00000516482 106 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 SCARNA15-202ENST00000516881 127 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 AC134878.1-201ENST00000619901 243 ntBASIC2.2□□□□□ -2.06
MSL2Q9HCI7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
MSL2Q9HCI7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MSL2Q9HCI7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MSL2Q9HCI7 SNORA63.5-201ENST00000363548 123 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 AC063976.4-201ENST00000421971 163 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 RNA5SP282-201ENST00000516355 108 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 RNY4P20-201ENST00000516678 93 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 AP003484.1-201ENST00000530974 250 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 MIR3613-201ENST00000579844 87 ntBASIC2.19□□□□□ -2.06
MSL2Q9HCI7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MSL2Q9HCI7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 RNU1-133P-201ENST00000364867 167 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 Y_RNA.351-201ENST00000365436 96 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 RNU6-301P-201ENST00000384277 107 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 Y_RNA.549-201ENST00000384657 102 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 U8.16-201ENST00000391279 133 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 RNU7-181P-201ENST00000517234 74 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 AC021443.1-201ENST00000604478 211 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 MIR6817-201ENST00000615588 66 ntBASIC2.18□□□□□ -2.06
MSL2Q9HCI7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
MSL2Q9HCI7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RNU6-414P-201ENST00000363705 104 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RNA5SP68-201ENST00000363885 119 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RN7SL429P-201ENST00000479090 223 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RN7SL489P-201ENST00000486185 223 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RN7SL327P-201ENST00000488659 223 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RNU7-12P-201ENST00000516030 62 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 SUMO2P16-201ENST00000519475 264 ntBASIC2.17□□□□□ -2.06
MSL2Q9HCI7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
MSL2Q9HCI7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
MSL2Q9HCI7 MIR4778-201ENST00000577635 80 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms