Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Y_RNA.19-201ENST00000362462 99 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-1084P-201ENST00000362498 107 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 MIR516B2-201ENST00000385190 85 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-763P-201ENST00000390865 106 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-1248P-201ENST00000391096 64 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-131P-201ENST00000391144 107 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-985P-201ENST00000410182 104 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RPL21P38-201ENST00000418090 167 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 MRPS35P2-201ENST00000508242 191 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 AP003716.2-201ENST00000528260 108 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 AL356055.1-201ENST00000602528 446 ntBASIC0.98□□□□□ -2.25
RNF41Q9H4P4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 Y_RNA.210-201ENST00000364161 110 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 snoU2-30.1-201ENST00000365012 70 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 RNU6-910P-201ENST00000390844 107 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 AC005534.2-201ENST00000431047 433 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.97□□□□□ -2.25
RNF41Q9H4P4 RNU6-437P-201ENST00000459408 95 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 SNORA74.3-201ENST00000517108 154 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.97□□□□□ -2.25
RNF41Q9H4P4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 AC005357.1-201ENST00000588399 301 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
RNF41Q9H4P4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.25
RNF41Q9H4P4 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.238-201ENST00000364441 102 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 RNU6-290P-201ENST00000365212 101 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 RNU6-326P-201ENST00000365480 107 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 MIR136-201ENST00000385207 82 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
RNF41Q9H4P4 SNORD11-201ENST00000459124 84 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 SNORD79.1-201ENST00000516069 84 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 RNY3P15-201ENST00000516297 97 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 AC044792.1-201ENST00000593294 196 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 AC108706.1-201ENST00000611053 297 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 AL391903.3-201ENST00000612158 163 ntBASIC0.96□□□□□ -2.26
RNF41Q9H4P4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
RNF41Q9H4P4 RNU6-899P-201ENST00000363947 107 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 MTCO2P33-201ENST00000402100 465 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 AL603910.2-201ENST00000407268 136 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 SNORA31.4-201ENST00000516049 129 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 SNORA40.15-201ENST00000516884 107 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 AC008507.4-201ENST00000585464 127 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 AC087685.1-201ENST00000587507 141 ntBASIC0.95□□□□□ -2.26
RNF41Q9H4P4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.11-201ENST00000362375 109 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.16-201ENST00000362421 102 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.84-201ENST00000363011 104 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.217-201ENST00000364214 105 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 AC002429.1-201ENST00000437672 148 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 HMGN2P32-201ENST00000444648 269 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.641-201ENST00000459414 105 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 RNU6-830P-201ENST00000516353 107 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 RNU2-31P-201ENST00000516954 155 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 AP003733.2-201ENST00000529409 171 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 RPL23AP91-201ENST00000569211 455 ntBASIC0.94□□□□□ -2.26
RNF41Q9H4P4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.94□□□□□ -2.26
RNF41Q9H4P4 RNU6-268P-201ENST00000364174 107 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 RNU6-144P-201ENST00000383951 107 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 SNORD72-201ENST00000390994 80 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 AL731563.1-201ENST00000442202 214 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 SNORD123-201ENST00000459473 70 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 AC091959.1-201ENST00000495857 238 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 RNU7-41P-201ENST00000515917 61 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 SNORD111.1-201ENST00000516421 86 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 MIR2681-201ENST00000581814 105 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 AC013791.1-201ENST00000616619 62 ntBASIC0.93□□□□□ -2.26
RNF41Q9H4P4 RNU6-1272P-201ENST00000362776 107 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 AC245047.8-201ENST00000456455 284 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 MTND5P22-201ENST00000458380 195 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
RNF41Q9H4P4 RNU6-1143P-201ENST00000516125 104 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 SNORA27.4-201ENST00000516650 95 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 SNORA18.7-201ENST00000516910 131 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 MIR4764-201ENST00000580680 88 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 MIR548AR-201ENST00000582191 57 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 AL021707.8-201ENST00000609428 183 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 JPX_2.1-201ENST00000614161 69 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 AC007742.2-201ENST00000618226 398 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 AC022140.2-201ENST00000623500 188 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
RNF41Q9H4P4 SNORD14E-201ENST00000364009 85 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU6-639P-201ENST00000384074 107 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU6-662P-201ENST00000384253 104 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 SNORA80D-201ENST00000384488 135 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms