Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-324P-201ENST00000363957 106 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 SNORA1.2-201ENST00000365189 134 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 MIR518F-201ENST00000384973 87 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.64□□□□□ -2.51
TRIM4Q9C037 RNU6-504P-201ENST00000516568 104 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 AC092954.2-201ENST00000609103 430 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 AC022306.2-201ENST00000617563 647 ntBASIC-0.64□□□□□ -2.51
TRIM4Q9C037 RNU6-254P-201ENST00000363377 107 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 SNORD115-30-201ENST00000364117 82 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 RNU6-442P-201ENST00000383968 104 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
TRIM4Q9C037 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRIM4Q9C037 POLR2KP2-201ENST00000438155 177 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 AC083904.1-201ENST00000487828 231 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRIM4Q9C037 uc_338.28-201ENST00000612082 187 ntBASIC-0.65□□□□□ -2.51
TRIM4Q9C037 RNU6-268P-201ENST00000364174 107 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 SNORA72.3-201ENST00000365074 132 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 MIR563-201ENST00000385080 79 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 MCFD2P1-201ENST00000417812 300 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 MTND3P16-201ENST00000452205 344 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 snoU13.16-201ENST00000459350 104 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 PRDX4P1-201ENST00000507189 574 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 RNU6-180P-201ENST00000516697 61 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 MIR4752-201ENST00000579672 72 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 MIR3152-201ENST00000579801 74 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AC019193.3-201ENST00000609144 554 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AC109347.2-201ENST00000610220 349 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AC007494.3-201ENST00000624660 743 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AL162726.3-218ENST00000636401 95 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AC091304.10-201ENST00000641554 121 ntBASIC-0.66□□□□□ -2.52
TRIM4Q9C037 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.67□□□□□ -2.52
TRIM4Q9C037 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 SNORA72-201ENST00000384339 132 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 MIR588-201ENST00000384900 83 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 MTND1P27-201ENST00000451117 902 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 RNU2-60P-201ENST00000517290 128 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 MIR3915-201ENST00000578518 97 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRIM4Q9C037 AC006380.1-201ENST00000603598 186 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 AL442067.1-201ENST00000613261 223 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 MIR6514-201ENST00000622549 70 ntBASIC-0.67□□□□□ -2.52
TRIM4Q9C037 RNY1P16-201ENST00000363063 111 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 RNU6-595P-201ENST00000363944 107 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 SNORA25.7-201ENST00000364375 127 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 RNU6-10P-201ENST00000384036 107 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 MIR514A2-201ENST00000385131 88 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 MIR514A3-201ENST00000385132 88 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 MT-TH-201ENST00000387441 69 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.68□□□□□ -2.52
TRIM4Q9C037 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.68□□□□□ -2.52
TRIM4Q9C037 RNU6-897P-201ENST00000517135 105 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 RNA5SP47-201ENST00000517230 109 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 LRRC34P1-201ENST00000542742 915 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 AC124303.1-201ENST00000605703 360 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.68□□□□□ -2.52
TRIM4Q9C037 RNU6-522P-201ENST00000364497 107 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 SNORD38B-201ENST00000384690 67 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 MTCO1P5-201ENST00000433573 344 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRIM4Q9C037 SPINT5P-201ENST00000448174 155 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.69□□□□□ -2.52
TRIM4Q9C037 AL391099.1-201ENST00000624635 187 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 AP000720.1-201ENST00000625091 483 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 ZNF299P-201ENST00000406845 1804 ntBASIC-0.69□□□□□ -2.52
TRIM4Q9C037 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC236972.2-201ENST00000434979 310 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 RNU6-261P-201ENST00000459506 102 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC107297.1-201ENST00000459991 176 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.7□□□□□ -2.52
TRIM4Q9C037 SNORA40.9-201ENST00000515895 93 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 RNU6-135P-201ENST00000516769 101 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRIM4Q9C037 MTND1P24-201ENST00000552175 861 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 MIR4263-201ENST00000584745 83 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC040904.1-201ENST00000590850 223 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 RNU1-29P-201ENST00000606574 126 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AC134878.1-201ENST00000619901 243 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 AL391262.2-201ENST00000622466 494 ntBASIC-0.7□□□□□ -2.52
TRIM4Q9C037 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 RNU6-879P-201ENST00000364328 108 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 SNORA26.8-201ENST00000391306 124 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 NAMPTP3-201ENST00000569273 224 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 MIR4273-201ENST00000582824 84 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 AC121247.2-201ENST00000604776 136 ntBASIC-0.71□□□□□ -2.52
TRIM4Q9C037 MIR8066-201ENST00000617280 78 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms