Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 RNU6-490P-201ENST00000362985 107 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.387-201ENST00000383918 102 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 SNORA62.5-201ENST00000516634 120 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 RNU7-116P-201ENST00000516940 62 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 RN7SKP295-201ENST00000517264 153 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 AC093027.1-201ENST00000546698 429 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 POLR3GP1-201ENST00000594073 261 ntBASIC0.53□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.27-201ENST00000362540 103 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 SNORD14E-201ENST00000364009 85 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.310-201ENST00000365063 113 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU6-1175P-201ENST00000365200 107 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 MIR628-201ENST00000385229 95 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 SNORD28B-201ENST00000390993 75 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNY4P36-201ENST00000391116 96 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU6-994P-201ENST00000410507 111 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 MIR4423-201ENST00000580922 80 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 MIR4272-201ENST00000635924 64 ntBASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.52□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.5-201ENST00000362334 102 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.80-201ENST00000362996 102 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU6-1040P-201ENST00000383974 107 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 SNORD38C-201ENST00000384381 69 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.485-201ENST00000384395 102 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.570-201ENST00000384750 101 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 AF228730.4-201ENST00000421457 183 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU7-152P-201ENST00000458982 64 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.632-201ENST00000459189 102 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU4-57P-201ENST00000515980 135 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU4-77P-201ENST00000516692 156 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 AL355375.2-201ENST00000574825 175 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 UBE2V2P2-201ENST00000587677 504 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 AC023932.2-201ENST00000603176 175 ntBASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
RPAP1Q9BWH6 RNU6-1115P-201ENST00000362490 106 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 SNORA72.1-201ENST00000363485 129 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.203-201ENST00000364106 102 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.259-201ENST00000364619 101 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.456-201ENST00000384232 111 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.458-201ENST00000384240 102 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 SNORA2B-201ENST00000384583 137 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AL590004.1-201ENST00000405321 300 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 RNU2-70P-201ENST00000410718 179 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AC099799.1-201ENST00000439809 192 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AC005042.3-201ENST00000453230 174 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 RNU6-507P-201ENST00000516045 100 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 RNU6-875P-201ENST00000516488 106 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AC006600.1-201ENST00000572529 153 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 MIR5188-201ENST00000583467 113 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 SNORD58B-201ENST00000607313 66 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 MIR1302-1-201ENST00000637932 143 ntBASIC0.5□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.187-201ENST00000363918 113 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.529-201ENST00000384586 119 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 MIR1827-201ENST00000408549 66 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC082651.2-201ENST00000496833 166 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 FGF7P4-201ENST00000509595 295 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.661-201ENST00000516003 99 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC024405.2-202ENST00000532731 184 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC018659.1-201ENST00000551083 169 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 MIR4300-201ENST00000581016 96 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC012433.1-201ENST00000588916 398 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 VN1R91P-201ENST00000594377 169 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AP003357.1-201ENST00000604497 148 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 AC010205.1-201ENST00000616668 449 ntBASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.58-201ENST00000362807 102 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 Y_RNA.154-201ENST00000363624 102 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 U8.7-201ENST00000364940 136 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNY3P1-201ENST00000365085 102 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNY3-201ENST00000365484 102 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNU6-442P-201ENST00000383968 104 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 MIR570-201ENST00000384917 97 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNA5SP63-201ENST00000391225 112 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNA5SP95-201ENST00000410319 137 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNU6-613P-201ENST00000410412 108 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 MTND1P14-201ENST00000427400 950 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 SNORD19B-201ENST00000459623 84 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 RNU6-830P-201ENST00000516353 107 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 MIR3145-201ENST00000580727 82 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 DEFB117-201ENST00000602356 141 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 AC092447.9-201ENST00000603395 144 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 AC104695.3-201ENST00000604052 296 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 AC122108.2-201ENST00000611946 526 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 JPX_2.1-201ENST00000614161 69 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 AC133104.2-201ENST00000615272 193 ntBASIC0.48□□□□□ -2.33
RPAP1Q9BWH6 Pinc.1-201ENST00000616452 154 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms