Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.2□□□□□ -2.06
NDC1Q9BTX1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.19□□□□□ -2.06
NDC1Q9BTX1 RNU6-235P-201ENST00000362644 107 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.273-201ENST00000364703 102 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 RNA5SP109-201ENST00000391010 116 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.19□□□□□ -2.06
NDC1Q9BTX1 snoU13.15-201ENST00000459407 104 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 MIR3121-201ENST00000579680 77 ntBASIC2.19□□□□□ -2.06
NDC1Q9BTX1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
NDC1Q9BTX1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NDC1Q9BTX1 RNU6-888P-201ENST00000363010 101 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 RNU6-508P-201ENST00000363231 103 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.353-201ENST00000365440 108 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 SNORD18B-201ENST00000365659 72 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 SNORD24-201ENST00000383884 75 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 SNORD20-201ENST00000384550 80 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 SNORA48.1-201ENST00000390879 135 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 RNU6-693P-201ENST00000516134 107 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.690-201ENST00000516603 95 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 IGKV3-31-201ENST00000523109 329 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NDC1Q9BTX1 MIR4446-201ENST00000578505 67 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 MIR4762-201ENST00000585261 75 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 FO624990.1-201ENST00000636373 85 ntBASIC2.18□□□□□ -2.06
NDC1Q9BTX1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NDC1Q9BTX1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
NDC1Q9BTX1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NDC1Q9BTX1 MIR21-201ENST00000362134 72 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 RNU6-309P-201ENST00000364573 106 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 MIR548A2-201ENST00000384956 97 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 MIR891A-201ENST00000401237 79 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 AL603914.1-201ENST00000401964 204 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 SNRPGP13-201ENST00000442212 177 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 RNVU1-2-201ENST00000516326 135 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 SNORA31.11-201ENST00000516528 139 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 RNU7-28P-201ENST00000516759 62 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 AC090049.2-201ENST00000550377 109 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 U1.36-201ENST00000620684 176 ntBASIC2.17□□□□□ -2.06
NDC1Q9BTX1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NDC1Q9BTX1 ICE2P2-201ENST00000483823 2787 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NDC1Q9BTX1 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.81-201ENST00000362997 102 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 U8.5-201ENST00000364528 136 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.280-201ENST00000364765 112 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 MIR802-201ENST00000390235 94 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RNU6-440P-201ENST00000390882 105 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RNA5SP482-201ENST00000391269 118 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.16□□□□□ -2.06
NDC1Q9BTX1 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.16□□□□□ -2.06
NDC1Q9BTX1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RN7SKP179-201ENST00000516126 217 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 MIR8054-201ENST00000620877 86 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
NDC1Q9BTX1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.15□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.114-201ENST00000363265 113 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 RNU6-1292P-201ENST00000383856 107 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.563-201ENST00000384707 108 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 MIR518F-201ENST00000384973 87 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 AL158147.1-201ENST00000443970 75 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 RNU5E-3P-201ENST00000515913 68 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 Y_RNA.712-201ENST00000517011 92 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.15□□□□□ -2.07
NDC1Q9BTX1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
NDC1Q9BTX1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
NDC1Q9BTX1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NDC1Q9BTX1 MTND5P32-201ENST00000560711 1802 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SNORD14E-201ENST00000364009 85 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU6-215P-201ENST00000365169 102 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU6-442P-201ENST00000383968 104 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU6-950P-201ENST00000384651 107 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SNORA80E-201ENST00000384744 137 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 MIR520A-201ENST00000384862 85 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 SNORD77.3-201ENST00000391113 65 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU2-7P-201ENST00000410794 178 ntBASIC2.14□□□□□ -2.07
NDC1Q9BTX1 RNU6-772P-201ENST00000516042 105 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms