Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 SNORA36B-201ENST00000410438 131 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 RNA5SP247-201ENST00000411181 105 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 SNRPGP14-201ENST00000435400 219 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC010655.3-201ENST00000478818 450 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC131055.1-201ENST00000584626 316 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC005357.1-201ENST00000588399 301 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC013244.2-201ENST00000603396 103 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 AC104695.3-201ENST00000604052 296 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
KLHDC3Q9BQ90 Y_RNA.148-201ENST00000363557 117 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 Y_RNA.286-201ENST00000364813 102 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 SNORD42.2-201ENST00000365570 69 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 MTND4P19-201ENST00000446659 478 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 Y_RNA.639-201ENST00000458981 102 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 AC109810.1-201ENST00000534066 224 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 Pinc.1-201ENST00000616452 154 ntBASIC0.66□□□□□ -2.3
KLHDC3Q9BQ90 Y_RNA.136-201ENST00000363444 102 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-801P-201ENST00000364087 105 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-268P-201ENST00000364174 107 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.445-201ENST00000384168 102 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-1067P-201ENST00000384752 107 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 RPL23AP91-201ENST00000569211 455 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 MIR4300-201ENST00000581016 96 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 MIR376A1-201ENST00000616574 68 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC090971.5-201ENST00000621102 293 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC090574.1-201ENST00000623186 233 ntBASIC0.65□□□□□ -2.31
KLHDC3Q9BQ90 AC068700.1-201ENST00000565862 3754 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 SNORD113-8-201ENST00000363497 74 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 SNORD28B-201ENST00000390993 75 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 SNORA26.5-201ENST00000391215 123 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 RNU2-14P-201ENST00000411053 191 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 SNORD11-201ENST00000459124 84 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-191P-201ENST00000516295 94 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-1046P-201ENST00000516538 107 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 AC124312.5-201ENST00000604451 268 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 AC006441.5-201ENST00000612680 209 ntBASIC0.64□□□□□ -2.31
KLHDC3Q9BQ90 MIR369-201ENST00000362155 70 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 RNU4-90P-201ENST00000362773 141 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.183-201ENST00000363882 113 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-899P-201ENST00000363947 107 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.224-201ENST00000364308 111 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.418-201ENST00000384029 102 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 U8.17-201ENST00000391292 132 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 SNORD111-201ENST00000408139 94 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.715-201ENST00000517082 110 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.813-201ENST00000364639 102 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 SNORA1.2-201ENST00000365189 134 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-144P-201ENST00000383951 107 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 SNORD72-201ENST00000390994 80 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MTCO2P33-201ENST00000402100 465 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 AL603910.2-201ENST00000407268 136 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MIR1302-7-201ENST00000408841 72 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MTATP6P23-201ENST00000440153 476 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 HSPE1P25-201ENST00000455484 251 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 AC067940.1-201ENST00000458411 300 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 AC036111.3-201ENST00000526389 112 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 AP001094.1-201ENST00000579805 193 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 C8orf59P2-201ENST00000603441 271 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
KLHDC3Q9BQ90 SNORD113.3-201ENST00000364630 78 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-102P-201ENST00000384485 104 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.537-201ENST00000384626 109 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 SNORD115-46-201ENST00000390982 71 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 Y_RNA.645-201ENST00000391229 102 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-613P-201ENST00000410412 108 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 AC005534.2-201ENST00000431047 433 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 MTND4LP30-201ENST00000454092 297 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-496P-201ENST00000516145 99 ntBASIC0.61□□□□□ -2.31
KLHDC3Q9BQ90 RNU6-397P-201ENST00000516226 104 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 354 ms