Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC009779.6-201ENST00000603972 165 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 AC011921.3-201ENST00000605540 361 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
NPAS1Q99742 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
NPAS1Q99742 RNU6-1020P-201ENST00000363684 107 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 RNU6-457P-201ENST00000363999 107 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 RNY1-201ENST00000364228 113 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 Y_RNA.297-201ENST00000364950 91 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 Y_RNA.336-201ENST00000365307 109 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 MIR194-1-201ENST00000384892 85 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 MIR616-201ENST00000385293 97 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 AL606845.1-201ENST00000404881 255 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 Y_RNA.797-201ENST00000515977 94 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 RNU6-453P-201ENST00000516819 85 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS1Q99742 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
NPAS1Q99742 MIR3937-201ENST00000580135 106 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 RNU2-4P-201ENST00000606190 192 ntBASIC1.64□□□□□ -2.15
NPAS1Q99742 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NPAS1Q99742 MIR411-201ENST00000362239 96 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 Y_RNA.7-201ENST00000362352 102 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 snoU2_19.4-201ENST00000364329 80 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 RNU4-70P-201ENST00000384579 139 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 MIR452-201ENST00000385020 85 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 SNORD72-201ENST00000390994 80 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 Y_RNA.793-201ENST00000411222 111 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 MTND5P15-201ENST00000434246 349 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 AC079140.2-201ENST00000506193 142 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 RNU6-322P-201ENST00000516010 103 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 MIR3671-201ENST00000580455 88 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 AC008507.4-201ENST00000585464 127 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.63□□□□□ -2.15
NPAS1Q99742 SNORD33-201ENST00000362761 85 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 RNU6-103P-201ENST00000363686 107 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 SNORD38C-201ENST00000384381 69 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 MIR516B2-201ENST00000385190 85 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 RNU6-381P-201ENST00000391259 108 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 SNORA79-201ENST00000408376 140 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS1Q99742 AL121914.1-201ENST00000450188 156 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 AL138752.1-201ENST00000452964 351 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.62□□□□□ -2.15
NPAS1Q99742 RNA5SP182-201ENST00000516064 82 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 RNU6-1299P-201ENST00000516316 100 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.62□□□□□ -2.15
NPAS1Q99742 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 FAM106DP-201ENST00000586416 501 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 Z83818.1-201ENST00000603584 150 ntBASIC1.62□□□□□ -2.15
NPAS1Q99742 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NPAS1Q99742 Y_RNA.182-201ENST00000363880 111 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 Y_RNA.238-201ENST00000364441 102 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 SNORD1A-201ENST00000364968 72 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU6-728P-201ENST00000365375 104 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU6-1318P-201ENST00000365389 103 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU6-1065P-201ENST00000384513 106 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU6-1228P-201ENST00000391014 107 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU2-70P-201ENST00000410718 179 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 SCARNA8-201ENST00000515924 131 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 MIR4662B-201ENST00000579498 81 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 MIR4744-201ENST00000581563 82 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 AL391903.3-201ENST00000612158 163 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
NPAS1Q99742 RNU6-200P-201ENST00000364743 107 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 RNY3P5-201ENST00000384127 102 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 Y_RNA.571-201ENST00000384753 98 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 MIR136-201ENST00000385207 82 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 AC015922.2-201ENST00000435593 184 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.6□□□□□ -2.15
NPAS1Q99742 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.6□□□□□ -2.15
NPAS1Q99742 AC015688.6-201ENST00000577737 104 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 AL365434.2-201ENST00000607979 234 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 AL021707.8-201ENST00000609428 183 ntBASIC1.6□□□□□ -2.15
NPAS1Q99742 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NPAS1Q99742 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 Y_RNA.274-201ENST00000364714 101 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 SNORA2.2-201ENST00000365473 135 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 Y_RNA.432-201ENST00000384087 111 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 AL451046.2-201ENST00000403074 277 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 Y_RNA.644-201ENST00000459006 113 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.59□□□□□ -2.15
NPAS1Q99742 AC107393.1-201ENST00000512403 346 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 RNU6-138P-201ENST00000515952 107 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 Y_RNA.674-201ENST00000516362 113 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 RNU6-126P-201ENST00000516685 103 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 RNU6-365P-201ENST00000517113 106 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NPAS1Q99742 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 AC015726.2-201ENST00000620112 122 ntBASIC1.59□□□□□ -2.15
NPAS1Q99742 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
NPAS1Q99742 RNU6-1138P-201ENST00000365359 106 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms