Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SNORA25.1-201ENST00000362326 128 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 RNU6-238P-201ENST00000363313 106 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 U8.5-201ENST00000364528 136 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 SNORD50B-201ENST00000364995 70 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 Y_RNA.512-201ENST00000384518 102 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 MIR653-201ENST00000385279 96 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CDCA3Q99618 MIR1278-201ENST00000408753 81 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
CDCA3Q99618 RNU6-635P-201ENST00000516651 102 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 SCARNA24.2-201ENST00000516968 130 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 Y_RNA.714-201ENST00000517065 90 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 AC090049.2-201ENST00000550377 109 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.22□□□□□ -2.21
CDCA3Q99618 RNU6-1209P-201ENST00000363655 107 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-514P-201ENST00000384208 107 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-662P-201ENST00000384253 104 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 MIR526A1-201ENST00000384897 85 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 MIR1298-201ENST00000408783 112 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-437P-201ENST00000459408 95 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 Y_RNA.637-201ENST00000459424 114 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-322P-201ENST00000516010 103 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 AC008737.2-201ENST00000599446 118 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 JPX_2.1-201ENST00000614161 69 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
CDCA3Q99618 RNU6-899P-201ENST00000363947 107 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 SNORA63C-201ENST00000364578 129 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 snoU2-30.1-201ENST00000365012 70 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 AC091959.1-201ENST00000495857 238 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 RNU6-1338P-201ENST00000516328 91 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 DEFB108E-201ENST00000524692 240 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 AC005357.1-201ENST00000588399 301 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
CDCA3Q99618 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CDCA3Q99618 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 RNU6-1203P-201ENST00000410703 110 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 MTND4LP30-201ENST00000454092 297 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
CDCA3Q99618 SNORA27.4-201ENST00000516650 95 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 RPL23AP91-201ENST00000569211 455 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
CDCA3Q99618 RNU6-1205P-201ENST00000363625 106 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 RNU6-674P-201ENST00000363831 107 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 Y_RNA.376-201ENST00000365638 108 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 RNU6-713P-201ENST00000384761 107 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 MIR516B2-201ENST00000385190 85 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.18□□□□□ -2.22
CDCA3Q99618 SERF1AP1-201ENST00000514575 187 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 MIR2681-201ENST00000581814 105 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 AC013791.1-201ENST00000616619 62 ntBASIC1.18□□□□□ -2.22
CDCA3Q99618 Y_RNA.36-201ENST00000362602 112 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 Y_RNA.145-201ENST00000363527 102 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 BTF3P11-201ENST00000426582 477 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 TRBVB-201ENST00000477100 408 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 MIR5692C2-201ENST00000577959 77 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 MIR6779-201ENST00000617283 64 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 snoU18.1-201ENST00000629629 71 ntBASIC1.17□□□□□ -2.22
CDCA3Q99618 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 RNU6-1272P-201ENST00000362776 107 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 RNU6-969P-201ENST00000383900 105 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 RNU6-144P-201ENST00000383951 107 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 Y_RNA.459-201ENST00000384251 102 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 RNU6-738P-201ENST00000384531 106 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 RNU6-383P-201ENST00000410864 94 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 NDUFA4P2-201ENST00000489989 244 ntBASIC1.16□□□□□ -2.22
CDCA3Q99618 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDCA3Q99618 AC068700.1-201ENST00000565862 3754 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 SNORD14E-201ENST00000364009 85 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.217-201ENST00000364214 105 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.237-201ENST00000364439 102 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.293-201ENST00000364908 93 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 MIR136-201ENST00000385207 82 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.641-201ENST00000459414 105 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.15□□□□□ -2.23
CDCA3Q99618 AC090142.3-201ENST00000519012 385 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 AP001282.2-201ENST00000616149 309 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 AC007742.2-201ENST00000618226 398 ntBASIC1.15□□□□□ -2.23
CDCA3Q99618 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.23
CDCA3Q99618 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
CDCA3Q99618 Y_RNA.176-201ENST00000363815 109 ntBASIC1.14□□□□□ -2.23
CDCA3Q99618 Y_RNA.574-201ENST00000384766 95 ntBASIC1.14□□□□□ -2.23
CDCA3Q99618 MIR802-201ENST00000390235 94 ntBASIC1.14□□□□□ -2.23
CDCA3Q99618 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms