Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MICF-203ENST00000432679 129 ntBASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 RNY4P20-201ENST00000516678 93 ntBASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR4662B-201ENST00000579498 81 ntBASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDK5RAP1Q96SZ6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 AC080128.1-201ENST00000474389 1917 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 RNA5SP289-201ENST00000362332 137 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-888P-201ENST00000363010 101 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 RN7SKP192-201ENST00000411291 327 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 COX6CP6-201ENST00000490840 228 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 HMGN1P7-201ENST00000491722 313 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 RPS29P21-201ENST00000496272 170 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 AC022523.2-201ENST00000561045 150 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 AC008507.4-201ENST00000585464 127 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR1245B-201ENST00000636115 69 ntBASIC2.45□□□□□ -2.02
CDK5RAP1Q96SZ6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-1104P-201ENST00000384723 104 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR1253-201ENST00000408273 105 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 RNA5SP136-201ENST00000410906 107 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 SNORA40.13-201ENST00000516379 120 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 RNA5SP281-201ENST00000516504 135 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR3199-1-201ENST00000582434 88 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 AC046143.2-201ENST00000609789 160 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR7157-201ENST00000635801 60 ntBASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.44□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-414P-201ENST00000363705 104 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 Y_RNA.344-201ENST00000365381 112 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 Y_RNA.558-201ENST00000384685 113 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 SNORA80E-201ENST00000384744 137 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 AC023141.11-201ENST00000508864 202 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 AC091544.4-201ENST00000555268 342 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 HSPE1P19-201ENST00000603327 295 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 U6.108-201ENST00000637764 58 ntBASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU1-96P-201ENST00000364163 162 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 Y_RNA.323-201ENST00000365157 109 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 AC093259.1-201ENST00000509755 300 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-856P-201ENST00000516959 98 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 AC141557.1-201ENST00000540982 400 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR5197-201ENST00000583721 112 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-94P-201ENST00000607728 107 ntBASIC2.42□□□□□ -2.02
CDK5RAP1Q96SZ6 AL589743.1-201ENST00000551932 2712 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR126-201ENST00000362291 85 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 SNORD24-201ENST00000383884 75 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-546P-201ENST00000383991 107 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU6-220P-201ENST00000390919 107 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU2-48P-201ENST00000410694 191 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 RPS3AP1-201ENST00000413190 320 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 SNRPGP13-201ENST00000442212 177 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 RNU7-25P-201ENST00000516544 62 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 SUMO2P16-201ENST00000519475 264 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 MIR5009-201ENST00000578736 100 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 AL442128.1-201ENST00000615151 90 ntBASIC2.41□□□□□ -2.02
CDK5RAP1Q96SZ6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
CDK5RAP1Q96SZ6 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 Y_RNA.198-201ENST00000364013 98 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU1-91P-201ENST00000364746 163 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-690P-201ENST00000365242 106 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR520G-201ENST00000385064 90 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR548O-201ENST00000408583 114 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 EDDM3CP-201ENST00000415977 425 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RNA5SP57-201ENST00000459463 123 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SL429P-201ENST00000479090 223 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SL489P-201ENST00000486185 223 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SL327P-201ENST00000488659 223 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU2-34P-201ENST00000516534 121 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 SNORD36C-201ENST00000516733 66 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 AC068339.1-201ENST00000526965 141 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RN7SL853P-201ENST00000617250 223 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR6079-201ENST00000635807 62 ntBASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDK5RAP1Q96SZ6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 MIR494-201ENST00000349529 81 ntBASIC2.39□□□□□ -2.03
CDK5RAP1Q96SZ6 RNU6-349P-201ENST00000362402 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms